Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2770 149 4e-31 >seq2770 Length=41231 Score = 149 bits (164), Expect = 4e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| || ||||||||||||||||| | ||| |||||| |||||||||||||| | Sbjct 19831 TTCCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTG 19772 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| | || |||| || |||||||| || ||||| || || |||||||| || | | Sbjct 19771 AAAGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAG 19712 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || || || ||| || ||| || | | || | |||| || ||||| Sbjct 19711 GTATGCCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAA 19652 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | ||||| ||||| || || || ||||| ||||||||||||||| Sbjct 19651 CCTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCATA 19602 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| || | || || ||| | ||||| ||| |||||| || || || ||||| | Sbjct 21199 TTCCTCCTCTAAGCCGCAGAACAAGGTGAAGTGTTGATTCTTTTTGGATATTGTAGTCAG 21140 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 ||||| |||| |||| || ||||||||||| |||||||| || | || || || | | Sbjct 21139 AAAGGGTTCGACCATCTTCTAGCTGTTTTCCTGCAAATATGAGCCTCTGTTGATCAGGTG 21080 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || || || |||||| || || | | || | |||| | ||||| Sbjct 21079 GAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGCTCAA 21020 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | ||||||||||| || || |||||||| ||||| || ||||| Sbjct 21019 CTTCTAATGTTATGGTTTTCCCAGTAAGAGTCTTAACAAAAATTTGCAT 20971 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || |||| ||| | ||||||||| | ||| ||||||||| ||||||||||| || Sbjct 19145 CCACCTCTCAGCCTAAGAACCAAGTGTAGTGTCGATTCTTTCTGGATGTTATAGTCTGAC 19086 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| |||| || || || || || ||||| || || | |||||||| | || Sbjct 19085 AATGTACGTCCATCTTCGAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 19026 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || || || ||| || || || | |||| | |||| | |||||| Sbjct 19025 ATTCCTTCTTTATCCTGAATTTTAACCTTAACATTTTCTATGGTGTCACTAGGCTCAACC 18966 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | || ||||| || || || || || ||||||||||||||||| Sbjct 18965 TCTAATGTGATGGTCTTGCCAGTAAGTGTTTTCACAAAGATCTGCAT 18919 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || || ||||| || || || | ||||| ||| |||||| ||||||||||| || || Sbjct 20513 CCACCTCTCAATCTTAATACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATCTGAT 20454 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || ||||| || || ||||| || |||| || || || | || Sbjct 20453 AGTGTGCGACCATCTTCTAGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGGA 20394 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || || || |||||| |||||| | | || | |||| | || || Sbjct 20393 ATACCTTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATTGTGTCACTTGGTTCCACC 20334 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || ||||| || || || ||||| || ||||| ||||||||| Sbjct 20333 TCAAGTGTAATGGTCTTACCAGTAAGAGTTTTGACAAAAATCTGCATA 20286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324032952159792