Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_015585.1 Length=43032 Score E Sequences producing significant alignments: (Bits) Value seq3139 123 7e-24 >seq3139 Length=44538 Score = 123 bits (136), Expect = 7e-24 Identities = 197/280 (70%), Gaps = 2/280 (1%) Strand=Plus/Plus Query 17373 GGCACTGGTATGAAGTTCGACGGAGACAAGCCGCGTATGGACCTGCTGTTCGATGGCATG 17432 |||||||||||||||| || || | ||||| |||||||| |||||| | | || Sbjct 33538 GGCACTGGTATGAAGTATGATGGTGGTAAGCCACGTATGGAACTGCTGGTGCAGGGTTGT 33597 Query 17433 CCCCACGCACTCGAAGCTGTCGGCCAG-GTGCTGACCTTCGGTGCCCGTAAGTATGCAGC 17491 || |||| || || || | ||||| || || |||||||||||| ||||| || || Sbjct 33598 CCGAACGCCCTGGA-GCAGGTAGCCAGCGTCCTAACCTTCGGTGCCGAGAAGTACGCCGC 33656 Query 17492 GCATTCCTGGCAGACTGTAGAAGGCGGTGAGCAGCGATACAAGGCTGCACTGATTCGCCA 17551 ||| ||||||||| ||| |||||| | || ||| ||| |||||| | || || Sbjct 33657 ACATAGCTGGCAGACGGTACCTAACGGTGACGACCGTTACCTGGCCGCACTGCTGCGTCA 33716 Query 17552 CCTGACTGCCGTAGGTAAGGGTGAAGCTCTGGACTCTGAGAGCAACCTACATCACCTGGC 17611 ||| || ||||| ||||| || || || ||| | ||||| | | |||||||| Sbjct 33717 CCTTACCGCCGTTGGTAAAGGAGAGGCAACTGACCCGGAGAGTGGCATGAGCCACCTGGC 33776 Query 17612 ACACCTGGCGTGCAACGCATTGTTTATCCTGGAACTGGAG 17651 ||| | || || || || |||| || ||||| |||||| Sbjct 33777 TCACGTAGCATGTAATGCTCTGTTCATTCTGGAGCTGGAG 33816 Score = 95.1 bits (104), Expect = 3e-15 Identities = 306/469 (65%), Gaps = 17/469 (4%) Strand=Plus/Plus Query 12101 GGTATGATGCAGTTCATCCA--ACCGGATGGCGTGGTACACCACAGCATCAACATGACAT 12158 || |||||||| ||||| | || || || | || ||||||||| | ||| | || Sbjct 26845 GGCATGATGCAATTCATTGATGACAAGA--GCATCGTGCACCACAGCCTGAACGTTACCG 26902 Query 12159 CGACCGAGACCACACGCCTGTCATCGTCTCGTCCGAATAGTCAGAACCTGCCGCGCAAAG 12218 | || | ||| || || ||| || ||||| |||||||| || || | | Sbjct 26903 CTACGGTGACTACGCGACTGAGTTCAAGCAACCCGAACCTCCAGAACCTCCCACGAGATG 26962 Query 12219 GCACGAGTAAGGTTAAGCAGATGTTCACCAGCCGCTTTGGTGGCGAGGGTAAAATCTGTG 12278 | ||| |||||||||||||||||||||||||| || |||| | ||| ||| || Sbjct 26963 GGACGTCCAAGGTTAAGCAGATGTTCACCAGCCGATTCGGTGAGAACGGTCGCATCATTG 27022 Query 12279 AGGCTGACTACTCCGCCCTGGAAGTGGTGGGTCAGTGTGGGTTCACGAAGGATAAGAACC 12338 ||| || |||||||| |||||||| || | |||| | | || ||||| | || Sbjct 27023 AGGTGGATTACTCCGCACTGGAAGTTGTAATGCTCTGTGCGATGACACGGGATATGGACT 27082 Query 12339 TGACACAGGCGCTG---CTCGATGGCACAGACATGCACTGCATGCGACTGTCTCAGCAAC 12395 || | ||||||| | | || ||| |||||||||||| |||||| | | | | Sbjct 27083 TG---CTGGCGCTGTTACAGGCTGACACTGACATGCACTGCTATCGACTGGCGTACCGCC 27139 Query 12396 TGAATGAGGACTACGAGAGCGTGCTCCTCAAGGCGAAGAAGGACGAGAGCCATCCAGACC 12455 || || |||||| ||| | ||| | || || || || || || | Sbjct 27140 TGGGCGAATCGTACGAGGATGTGTACGAGAAGTGCCACAACGAAGA---ACACCCGGAGC 27196 Query 12456 ACAAGCGCTATGACGAAATGCGTACGGCCATTAAGCCGAAGGCATTCTCGTATCAGTATG 12515 ||||| || | | ||||| |||| ||||||||| | |||| | | ||||| | Sbjct 27197 ACAAGAAGTACAAGCAGATGCGAACGGATATTAAGCCGCTGTCATTTGCTGACCAGTACG 27256 Query 12516 GTGCAACGGCGATGGGCATCGCGTATTCAACA--GGCTGCTCTGTTGAG 12562 |||| ||||| ||| | ||| ||||||| || || ||| ||||| Sbjct 27257 GTGCTACGGCAGCCGGCCTGGCG--TTCAACACCGGTTGTTCTATTGAG 27303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137332770537592