Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq8063 147 3e-30 >seq8063 Length=21912 Score = 147 bits (162), Expect = 3e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 37563 AAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAA 37622 || |||||||| || || |||||||| |||||||| || || | || || ||||||| Sbjct 13765 AAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATATAAAA 13824 Query 37623 TGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCA 37682 ||| |||| ||| | |||||||| ||| ||||| | |||||| |||||||||||||| Sbjct 13825 TGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAACTTCT 13884 Query 37683 TCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGT 37742 ||||| ||||||||| || ||| |||||||||| ||| ||||| | | | Sbjct 13885 TCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTACTCA 13944 Query 37743 ATTGGAAATATTACAAATCTA 37763 |||||||||| ||||||||| Sbjct 13945 ATTGGAAATACAACAAATCTA 13965 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 ||||||| |||||||| |||||||| || || | || ||||| | ||||||||| | Sbjct 10432 CTTCATCCCTACTTATTAATTCATTGCTGAATGTAAGACCAGGCATAAGACCTCTTTTCT 10491 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | |||||| || | ||||||||| ||||| || || || ||||||||||| ||||||| Sbjct 10492 TCAACCAAAAGATAGATGCAAAAGAACCAGAGAAAAATATCCCTTCAACTGCAGCAAATG 10551 Query 37318 CTAC 37321 | || Sbjct 10552 CAAC 10555 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 37440 TCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCT 37499 ||| | || || ||||||||||| | |||||||||||||| || | ||||||||| ||| Sbjct 13318 TCTTTGATGTATGTATCAATTAGAAGGCTATACATTTCAGAATGTACATTTTCAATTGCT 13377 Query 37500 ATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATC 37543 || || || |||||||| || || ||||| | || ||| || || Sbjct 13378 ATTTGGAATCCATAAAAGCATCTTGCTTCTGTTACTTGCACTTC 13421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591192775216560