Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2770 96.9 3e-15 >seq2770 Length=41231 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||||||||| || ||||| ||||| | ||| | || || | ||||||||| ||||| Sbjct 20477 TCTTTTTGAATGTTATAATCTGATAGTGTGCGACCATCTTCTAGCTGCTTACCAGCAAAA 20418 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || |||| ||||||||| | |||| || || || || |||||| ||| ||| Sbjct 20417 ATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTTATCTTGAATCTTAGCTTTGACATTT 20358 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || | |||||||| | ||||| || || || || | |||||| ||| Sbjct 20357 TCAATTGTGTCACTTGGTTCCACCTCAAGTGTAATGGTCTTACCAGTAAGAGTTTTGACA 20298 Query 48756 AAAATCTGCAT 48766 ||||||||||| Sbjct 20297 AAAATCTGCAT 20287 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| |||||||| || || || ||||| || || ||||| || | ||| Sbjct 22630 AGTCGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCTGACAAGGTTCTG 22571 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| ||||||||| ||||| || || ||||||||||| | ||||| |||||| Sbjct 22570 CCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGGGGAATGCCCTCT 22511 Query 48669 TTGTCGCTAATCTTTTGTTTTACA 48692 || || |||||| ||||||| Sbjct 22510 TTATCCTGGATCTTTGCTTTTACA 22487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380232776633922