Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_019528.1 Length=41572 Score E Sequences producing significant alignments: (Bits) Value seq3139 91.5 4e-14 >seq3139 Length=44538 Score = 91.5 bits (100), Expect = 4e-14 Identities = 349/542 (64%), Gaps = 22/542 (4%) Strand=Plus/Minus Query 16343 TTCTGCAGTTGGGAACCGTCCCGGCCAGATGCGGACCTCATACCCGCGAGCTTCCAGGGT 16402 |||| | || || | || || ||||| | ||| | |||| | || || || ||||||| Sbjct 9036 TTCTACGGTAGGTACGCGACCAGGCCATACGCGAATCTCAAAGCCACGCGCCGCCAGGGT 8977 Query 16403 GTTGTAGATGGAGTCGCTGGACTGTGGAGTACCAAGGTAAAGGATGCGCCCGTTCTGGTT 16462 |||||||| ||| ||| ||| || || || ||||| || | ||||| | || Sbjct 8976 CTTGTAGATACTGTCTTTGGTCTGCGGTGTCCCCAGGTACAGAGTCTTCCCGTGCGTATT 8917 Query 16463 GATTGAGGTGAAGTCCAGGGTTTTAGC----CAGGAGCTGTTCACGCATCAGCGCAGTAA 16518 || | || ||||||| || ||| ||| ||| |||||| | || || | Sbjct 8916 AATCGCGGAGAAGTCCTTGG----AGCGCAACAGCAGCACTTCACGGTTTGTAGCCGTCA 8861 Query 16519 GGGAGTTCTTCTGGGATTCGATGTCATCTGCGAGCAGCAGGTCAGCACGACGACCCTGCA 16578 | ||| ||| | ||||| ||||||| | |||||| |||||||| |||||||| Sbjct 8860 GACCGTTGTTCGTAGTCTCGATATCATCTGGAATCAGCAGATCAGCACGCTTACCCTGCA 8801 Query 16579 AGTTCGCGGTGATACCGCAACAGGAGACGCTCGCCGACTTGTCCA---GCTTGCGGAGAG 16635 || ||||||||||| || | ||||| || || || |||| |||| || Sbjct 8800 AGGATGCGGTGATACCTACGCATGCCACGCTGGCGGATTTATCCAGGGGCTT---CAGGT 8744 Query 16636 AGTAGTGAAGGTCGAACTTCTCAACCGATACCCGGTCACCCTTGGACTTGTCCGGTCGGA 16695 | |||| | ||| | ||| | |||| |||||||| || |||| || || | Sbjct 8743 CGCAGTGTACGTCATAGTTCGCGTACGATGTACGGTCACCACGGGTGCTGTCTGGCCGTA 8684 Query 16696 TACACTCCAGCACGTCC--ATGTTCATGATGATTCGGATTACCAGGGTCGAGATGTCCGT 16753 || |||| | || || ||| || |||||||| || | | | ||| | Sbjct 8683 ACCAGCATAGCAAGCCCCACTGCTCA--ATCATTCGGATAACTAACAGTGCAACGTCGGA 8626 Query 16754 CGCCTGTGAGCCACCTGCGGAGATGATTAGAACCCGGT--GTTTCGGGTCGTGCATGAGC 16811 |||||| | |||| |||||| || || ||||||| | || |||| | || || Sbjct 8625 CGCCTGCGCCTCACCACCGGAGACAATCAGTACCCGGTAGGATT--GGTCACGGATAAGG 8568 Query 16812 GTCCACACACAGAAGGCTGCGGCGATGGTGGTCTTTGCCTGTGACCGCTGTGCTTCCACC 16871 |||||||| ||| || || | ||||| ||| |||| |||||||| ||||| Sbjct 8567 TTCCACACAGCGAACAGCGCAGCCAGGGTGGACTTGGCCTCCCCACGCTGTGCCGCCACC 8508 Query 16872 AT 16873 || Sbjct 8507 AT 8506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132669193178312