Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_020078.1 Length=41796 Score E Sequences producing significant alignments: (Bits) Value seq3139 127 5e-25 >seq3139 Length=44538 Score = 127 bits (140), Expect = 5e-25 Identities = 203/284 (71%), Gaps = 8/284 (3%) Strand=Plus/Plus Query 16355 TGGTACTGGATTGAAGTTTGACGGCGATAAGCCACGTATGGATTTACTGCTGGACGGTTG 16414 ||| ||||| |||||| ||| || | ||||||||||||||| | ||| || | ||||| Sbjct 33537 TGGCACTGGTATGAAGTATGATGGTGGTAAGCCACGTATGGAACTGCTGGTGCAGGGTTG 33596 Query 16415 CCCGCTGGCGCTGCTGCGTATCAGCGA-CGTGCTGACCTTCGGCGCGAAGAAGTATGAAG 16473 ||| || ||| || | ||| | ||| || |||||||| || ||||||| | | Sbjct 33597 TCCGAACGCCCTGGAGCAGGT-AGCCAGCGTCCTAACCTTCGGTGCCGAGAAGTACGCCG 33655 Query 16474 CGCATAGCTGGCACACGGTAGCCGA-GGGCAAGACGCGCTACAAGGCGGCGCTGCTGCGG 16532 | ||||||||||| |||||| | | || | ||| || ||| ||| || |||||||| Sbjct 33656 CACATAGCTGGCAGACGGTACCTAACGGTGACGAC-CGTTACCTGGCCGCACTGCTGCGT 33714 Query 16533 CACCTGACGGCTCACGCCCAGGGCGAAGTGAATGACCCGGAGAGTGGCCTGCCGCACCTG 16592 ||||| || || | | || || | | |||||||||||||||| || |||||| Sbjct 33715 CACCTTACCGCCGTTGGTAAAGGAGAGGCAACTGACCCGGAGAGTGGCATGAGCCACCTG 33774 Query 16593 GCACACGCCGCTTG--CTGCTCACTGTTCATCCTGGAGTTAGAG 16634 || |||| || || |||| |||||||| |||||| | ||| Sbjct 33775 GCTCACGTAGCATGTAATGCT--CTGTTCATTCTGGAGCTGGAG 33816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133384700937544