Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2770 167 2e-36 >seq2770 Length=41231 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || |||||||| || || | || || || ||| Sbjct 19603 ATGCAGATCTTTGTAAAGACACTTACTGGTAAAACAATAACATTAGAGGTTGAGTCCAGT 19662 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| |||||| ||| || ||||| |||||||| |||||||| ||||| Sbjct 19663 GACACAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGCATACCTCCTGATCAG 19722 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || ||||| || |||||||| || ||| | | | | ||||| |||||| Sbjct 19723 CAACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGGCGTACGCTTTCAGACTATAAC 19782 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| ||||| |||||||| ||| | || | ||||| Sbjct 19783 ATTCAAAAAGAATCTACACTGCACTTGGTTTTGAGGTTAAGAGGAGG 19829 Score = 163 bits (180), Expect = 3e-35 Identities = 156/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 24731 GGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAG 24790 |||||||||||||| || ||||| ||| ||| || || | || | |||||| |||| Sbjct 22440 GGTAAAACTATTACTCTAGAAGTTGAACCCAGTGATACCATTGAGAATGTAAAAGCAAAG 22499 Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 ||||| || ||||| || || || || |||||||| ||| | |||||||| || || ||| Sbjct 22500 ATCCAGGATAAAGAGGGCATTCCCCCTGATCAACAGCGTCTTATCTTTGCTGGTAAGCAG 22559 Query 24851 CTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTG 24910 ||||| ||| |||| | |||||||||||||||| ||||||||||| || || || ||| Sbjct 22560 CTGGAAGATGGCAGAACCTTGTCAGATTATAACATCCAAAAGGAATCTACTCTGCATTTG 22619 Query 24911 GTGTTGCGATTGCGCGGAGG 24930 || |||||| | || || || Sbjct 22620 GTTTTGCGACTTCGTGGTGG 22639 Score = 147 bits (162), Expect = 2e-30 Identities = 158/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| ||||||| |||| |||||||| |||||| | ||||||||| ||| Sbjct 19375 ATGCAAATCTTCGTTAAAACATTAACTGGTAAAACCATTACGTTAGAAGTAGAACCCAGT 19434 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||||| || ||| ||| || ||||| || |||||||| ||||||||||| Sbjct 19435 GACACGATAGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGAATTCCTCCCGATCAG 19494 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | || |||||||| || ||||| || || ||| | | | ||||| ||||| Sbjct 19495 CAGAGGTTAATCTTTGCAGGTAAACAACTTGAAGATGGTCGCACTCTATCAGACTATAAT 19554 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 |||||||| ||||| || || || |||| Sbjct 19555 ATTCAAAAAGAATCTACCCTTCATCTTG 19582 Score = 141 bits (156), Expect = 8e-29 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || ||||| || ||||| || || || ||| | | Sbjct 20287 ATGCAGATTTTTGTCAAAACTCTTACTGGTAAGACCATTACACTTGAGGTGGAACCAAGT 20346 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || ||| ||||| ||||| |||||||| || ||||| |||||| Sbjct 20347 GACACAATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 20406 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | | || ||||| || || ||||| || ||| ||| | || | |||||||||| Sbjct 20407 CAGAGACTCATTTTTGCTGGTAAGCAGCTAGAAGATGGTCGC-ACAC-TATCAGATTATA 20464 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||| ||||| ||||| ||| | || || ||||| | || || Sbjct 20465 ACATTCAAAAAGAATCTACACTTCACCTTGTATTAAGATTGAGAGGTGG 20513 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || ||||||| |||| || ||||| || || || ||||| ||| | Sbjct 19147 ATGCAGATTTTCGTTAAAACCTTAACTGGCAAAACAATAACTCTAGAAGTTGAACAAAGT 19206 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| |||| | ||| || |||||||| ||||| || || || ||||| Sbjct 19207 GACACCATCGAGAACGTTAAAGCTAAA-ATTCAAGACAAGGAAGGTATTCCACCTGATCA 19265 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||||| || ||||| || || || || |||||| | | | |||||||| || Sbjct 19266 ACAACGTTTAATTTTTGCTGGTAAGCAACTTGAGGATGGACGTACTCTTTCAGATTACAA 19325 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || ||||| || || || || || Sbjct 19326 TATTCAGAAAGAATCAACCCTTCATTTAGT 19355 Score = 118 bits (130), Expect = 1e-21 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || |||| || ||||||||||| | |||||||| | | Sbjct 19831 ATGCAGATTTTTGTGAAGACATTAACTGGGAAAACTATTACCTTAGAAGTAGAGCCTAGT 19890 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || ||| || || ||||||||||||||||| || || |||||| Sbjct 19891 GATACAATTGAAAATGTTAAAGCTAAAATTCAAGACAAAGAAGGAATTCCACCAGATCAA 19950 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGATTAT 24880 || | || || ||||| || || ||||| || ||| ||| ||| | || || || Sbjct 19951 CAGAGGTTAATTTTTGCTGGTAAGCAGCTTGAAGATGGTCG---TACATTATCTGACTAC 20007 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| || ||||| || | || | || |||||| || | ||||| Sbjct 20008 AACATTCAGAAAGAATCTACTTTGCATCTCGTCTTGCGACTGAGAGGAGG 20057 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24698 GATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAA 24757 || || |||||||||||| | ||||| || || || || || || || | || || || Sbjct 18913 GAAACAATGCAGATCTTTGTGAAAACACTTACTGGCAAGACCATCACATTAGAGGTTGAG 18972 Query 24758 GCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCC 24817 | | ||||| |||||| || || || || || || ||||||||||| ||||| Sbjct 18973 CCTAGTGACACCATAGAAAATGTTAAGGTTAAAATTCAGGATAAAGAAGGAATCCCTCCT 19032 Query 24818 GATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGA 24876 || || || | |||| ||||| || || || || || || | || ||| ||||||| Sbjct 19033 GACCAGCAGAGGCTGATTTTTGCTGGCAAGCAACTCGAAGA-TGGACGTACATTGTCAGA 19091 Query 24877 TTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| || || |||||||||||||||||||| Sbjct 19092 CTATAACATCCAGAAAGAATCGACACTACACTTGGT 19127 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || ||||| || || || | ||||| ||| | | | Sbjct 20059 ATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACAATAACATTAGAAGTTGAACCTAGC 20118 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| ||||| || || ||||| ||||||||||| || || |||||| Sbjct 20119 GACACCATTGAAAACGTAAAGGCTAAAATTCAAGATAAAGAAGGAATCCCACCTGATCAA 20178 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||| ||||| || || || || || ||| | | |||| || || ||| Sbjct 20179 CAGAGATTGATATTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTGTCTGACTACAAC 20238 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 |||||||||||||| || || ||| Sbjct 20239 ATTCAAAAGGAATCTACTCTTCAC 20262 Score = 105 bits (116), Expect = 6e-18 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || | || |||||||| || || || || || || ||| Sbjct 20743 ATGCAAATATTCGTAAAGACCTTGACTGGTAAAACAATAACTCTAGAGGTTGAGCCCAGT 20802 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| || || ||||| |||||||| || ||||| ||||| Sbjct 20803 GATACTATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGCATTCCTCCTGATCAG 20862 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | || ||||| || |||||||| || ||| |||| | ||||| ||||| Sbjct 20863 CAGCGACTTATTTTTGCAGGAAAACAGCTTGAAGATGGCAGAACATTATCAGACTATAAT 20922 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 |||||||||||||| || || || |||| Sbjct 20923 ATTCAAAAGGAATCCACTCTGCATCTTG 20950 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || || || || ||||| || || | ||||| || | | Sbjct 20971 ATGCAAATTTTTGTTAAGACTCTTACTGGGAAAACCATAACATTAGAAGTTGAGCCTAGT 21030 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| ||||| ||||| ||||||||||| || || |||||| Sbjct 21031 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCACCTGATCAA 21090 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || |||||||| || ||| ||| | | || || || || Sbjct 21091 CAGAGGCTCATATTTGCAGGAAAACAGCTAGAAGATGGTCGAACCCTTTCTGACTACAAT 21150 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || ||||| ||||| ||||| ||| | || |||| Sbjct 21151 ATCCAAAAAGAATCAACACTTCACCTTGTTCTGCG 21185 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || || || |||||||| | ||||| || | | || || |||||| || || | Sbjct 21336 ACAGGAAAGACTATTACTTTAGAAGTTGAGCCTAGTGATACTATAGAAAATGTGAAGGCA 21395 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 || || ||||||||||| || || || || ||||| || | | || ||||| || ||| Sbjct 21396 AAAATTCAAGACAAAGAGGGCATTCCACCAGATCAGCAGAGGCTTATTTTTGCTGGTAAA 21455 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || || |||||| |||| | |||||||| || || ||||| ||||| || || || Sbjct 21456 CAACTAGAGGATGGTAGAACATTATCAGATTACAATATACAAAAAGAATCTACTCTTCAT 21515 Query 24908 TTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| | || | | |||||| Sbjct 21516 CTGGTGCTTAGACTTAGAGGAGGC 21539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449043840571920