Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_022746.1 Length=42957 Score E Sequences producing significant alignments: (Bits) Value seq3139 129 2e-25 >seq3139 Length=44538 Score = 129 bits (142), Expect = 2e-25 Identities = 238/349 (68%), Gaps = 0/349 (0%) Strand=Plus/Plus Query 39748 GGTGACCGTACCTCGGCCACCAGCTTCGACGTGAACTGGGCATTGAAGGGCGTCGAGAAA 39807 ||||||||||| ||| | | | || ||||| |||| | ||||| | | || ||| Sbjct 8704 GGTGACCGTACATCGTACGCGAACTATGACGTACACTGCGACCTGAAGCCCCTGGATAAA 8763 Query 39808 TCGGCCTCCATCAACTGCATCGGGATCACCGCTGCCCTCCAGGGCTACCGGGCTGACATC 39867 || ||| | | ||| | || |||||||| || | ||||| | || ||||| | Sbjct 8764 TCCGCCAGCGTGGCATGCGTAGGTATCACCGCATCCTTGCAGGGTAAGCGTGCTGATCTG 8823 Query 39868 CTGATCCCTGACGACATCGAGACCACGAAGAACGGCCTCACCGCCACCGAGCGGGCCAAG 39927 ||||| || || || |||||||| ||||| ||||| || || || || | || | | Sbjct 8824 CTGATTCCAGATGATATCGAGACTACGAACAACGGTCTGACGGCTACAAACCGTGAAGTG 8883 Query 39928 CTGACGCGGCAGTCGCAGGAGTTCACCTCTATCTGTACCCACGGTAAGATTCTCTACCTG 39987 ||| | || || |||| ||| || | || ||| ||||| |||| ||| |||||| Sbjct 8884 CTGCTGTTGCGCTCCAAGGACTTCTCCGCGATTAATACGCACGGGAAGACTCTGTACCTG 8943 Query 39988 GGCACGCCGCAGTCCCGTGAGTCGATCTACAACGGTCTGCCGGCGCGGGGCTTCCTGATG 40047 || || |||||| || || |||||||| ||| ||||||| ||||| ||| Sbjct 8944 GGGACACCGCAGACCAAAGACAGTATCTACAAGACCCTGGCGGCGCGTGGCTTTGAGATT 9003 Query 40048 CGCATCTGGCCGGGCCGCTTCCCGACCCTGGATGAGCAGGAACGCTACG 40096 ||| | ||||| || ||| | || ||| | || || ||||||| |||| Sbjct 9004 CGCGTATGGCCTGGTCGCGTACCTACCGTAGAAGAAGAGGAACGTTACG 9052 Score = 91.5 bits (100), Expect = 4e-14 Identities = 213/311 (68%), Gaps = 18/311 (6%) Strand=Plus/Plus Query 14082 GTCATGGACTTCAAGGACACGCAGATCGCCAACTACTGGAACCAGGGCGAGGCTGGGTTC 14141 |||||||||| ||| || ||||| || |||||| |||||| |||||||||||| Sbjct 27532 GTCATGGACTACAAACCAACCCAGATGGCTAACTACCCATTCCAGGGTGAGGCTGGGTTC 27591 Query 14142 ATGATGACCGTGAGCGTGGGGCGCATCTTCCGCTGG--ATGCTGCACCGCCCAGGATTCA 14199 ||||||| ||| || ||||||| |||| ||||||| | | | | | | || | | Sbjct 27592 ATGATGAGCGTAAGTATGGGGCGTATCTGCCGCTGGTTAATCAGTAAAG-ACTGGTTCGA 27650 Query 14200 TGGTCACCGAATTCCTGATCAACAACGTACACGATGCCGTGTACACCGACTGCCACAA-- 14257 ||| || | | |||| ||||||||||||||||| | ||||| || ||| ||| Sbjct 27651 TGGGCA-GGTGTGTTTGATTAACAACGTACACGATGCAGCGTACATGGA-TGCAGCAAAC 27708 Query 14258 --GGACACCGCCGCCGAGGTCAACAAGGGCGTGCG--CGACATCATGGCCGATGCTGCCC 14313 ||| | |||| || | || ||||| | ||||||| ||||| | | Sbjct 27709 CCGGAGGTAGGTCGTGAGG-CAGCCCTGG-GTGCGAAGGCAATCATGGAGGATGCACCGC 27766 Query 14314 GCTACATGAGCGAGCGCCTGGGC----TACGACATCGCAGACGTTCCGTTCCCGGCAGTG 14369 | ||||||| ||| | |||| | ||| |||| || || || || ||||| || | | Sbjct 27767 GGTACATGA-CGAACATCTGGCCGGAGTACAACATGGCGGATGTGCCTTTCCCAGCTGCG 27825 Query 14370 GCCGAGATGGG 14380 ||||||||||| Sbjct 27826 GCCGAGATGGG 27836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137093203207492