Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq2770 100 2e-16 >seq2770 Length=41231 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| |||||||| || || ||||| || ||||| |||||| | ||| ||| || | Sbjct 19830 AATGCAGATTTTTGTGAAGACATTAACTGGGAAAACTATTACCTTAGAAGTAGAGCCTAG 19889 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | || ||| || ||| || |||||||| | || ||||| Sbjct 19890 TGATACAATTGAAAATGTTAAAGCTAAAATTCAAGACAAAGAAGGAATTCCACCAGATCA 19949 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||| | |||| ||| ||||| ||||| || || | ||| | | |||||||| Sbjct 19950 ACAGAGGTTAATTTTTGCTGGTAAGCAGCTTGAAGATGGTCGTACATTATCTGACTACAA 20009 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||| || || ||||| ||||| | || ||| || || |||| || Sbjct 20010 CATTCAGAAAGAATCTACTTTGCATCTCGTCTTGCGACTGAGAGGAGG 20057 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||||||||||||| | || || || |||||||| | || ||| | | Sbjct 20287 ATGCAGATTTTTGTCAAAACTCTTACTGGTAAGACCATTACACTTGAGGTGGAACCAAGT 20346 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || ||| |||||| ||||||||||| | || ||||| Sbjct 20347 GACACAATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 20406 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||||| |||| ||| ||||| ||||| || || | ||| | | || || ||| Sbjct 20407 CAGAGACTCATTTTTGCTGGTAAGCAGCTAGAAGATGGTCGCACACTATCAGATTATAAC 20466 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| || ||||| | ||| | || || |||||| |||| || Sbjct 20467 ATTCAAAAAGAATCTACACTTCACCTTGTATTAAGATTGAGAGGTGG 20513 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || || || || || || || ||||| || || | || ||| | | Sbjct 20743 ATGCAAATATTCGTAAAGACCTTGACTGGTAAAACAATAACTCTAGAGGTTGAGCCCAGT 20802 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | ||||| || ||| |||||||||||| | || |||||| Sbjct 20803 GATACTATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGCATTCCTCCTGATCAG 20862 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| ||||||||| ||| || |||||||| || || | || |||| | | ||||| || Sbjct 20863 CAGCGACTTATTTTTGCAGGAAAACAGCTTGAAGATGGCAGAACATTATCAGACTATAAT 20922 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||||| || || |||| | ||| | ||| | |||| || Sbjct 20923 ATTCAAAAGGAATCCACTCTGCATCTTGTGCTCAGACTTAGAGGTGG 20969 Score = 89.7 bits (98), Expect = 4e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 107631 GTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTAT 107690 |||||| ||| ||| |||||||||||| | || |||||||| | || |||| | Sbjct 19678 GTAAAAGCAAAAATTCAAGATAAAGAAGGCATACCTCCTGATCAGCAACGTCTCATTTTT 19737 Query 107691 GCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCT 107750 || ||||||||||| || || | || | | ||||| ||||||||||| || ||| Sbjct 19738 GCTGGTAAACAGCTAGAAGATGGGCGTACGCTTTCAGACTATAACATTCAAAAAGAATCT 19797 Query 107751 ACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 || ||||| |||| ||||| || |||| |||| Sbjct 19798 ACACTGCACTTGGTTTTGAGGTTAAGAGGAGGAA 19831 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||||||||| || ||| | || || |||||||| || | ||| ||| || | Sbjct 20971 ATGCAAATTTTTGTTAAGACTCTTACTGGGAAAACCATAACATTAGAAGTTGAGCCTAGT 21030 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | ||||| |||||| ||||||||||| | || ||||| Sbjct 21031 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCACCTGATCAA 21090 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || |||||||| || || | ||| | | |||||||| Sbjct 21091 CAGAGGCTCATATTTGCAGGAAAACAGCTAGAAGATGGTCGAACCCTTTCTGACTACAAT 21150 Query 107736 ATTCAAAAGGAGTCTAC 107752 || ||||| || || || Sbjct 21151 ATCCAAAAAGAATCAAC 21167 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 107577 TTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGTCGGCCAGGTAAAA 107636 || ||||| || || ||||| | ||| ||| || | |||||| | | | || || Sbjct 21333 TTTACAGGAAAGACTATTACTTTAGAAGTTGAGCCTAGTGATACTATAGAAAATGTGAAG 21392 Query 107637 CAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGT 107696 ||| ||| || ||||| ||| | || ||||||||||| ||||||| ||| ||| Sbjct 21393 GCAAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAGCAGAGGCTTATTTTTGCTGGT 21452 Query 107697 AAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTG 107756 ||||| || ||||| | | |||| | | || ||||| || ||||| || ||||| | Sbjct 21453 AAACAACTAGAGGATGGTAGAACATTATCAGATTACAATATACAAAAAGAATCTACTCTT 21512 Query 107757 CACATGGTGTTGAGATTGCGAGGGGG 107782 || ||||| | ||| | |||| || Sbjct 21513 CATCTGGTGCTTAGACTTAGAGGAGG 21538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398138784931846