Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq2770 174 2e-38 seq13140 95.1 2e-14 >seq2770 Length=41231 Score = 174 bits (192), Expect = 2e-38 Identities = 165/211 (78%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| | ||||| ||||| || |||||||| ||| |||| ||||||| | | Sbjct 20516 TGCAAATATTCGTTAAAACTTTAACTGGTAAAACAATAACTCTTGAAGTAGAACCAAGTG 20575 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| ||| ||||| ||| ||||||||| ||||| || ||||| | Sbjct 20576 ATACGATAGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGGATTCCTCCAGATCAGC 20635 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || || ||||| ||||| |||||||| ||| || || ||| |||| ||||| | Sbjct 20636 AACGTCTTATCTTTGCTGGTAAGCAATTAGAAGATGGCAGGACTTTATCAGACTATAACA 20695 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATT 146242 | ||||||||||| ||| | |||||||| || Sbjct 20696 TCCAAAAAGAATCAACTTTACATTTAGTTTT 20726 Score = 165 bits (182), Expect = 1e-35 Identities = 172/226 (76%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| |||| || || || || |||||||| ||| | || || || | | | Sbjct 20744 TGCAAATATTCGTAAAGACCTTGACTGGTAAAACAATAACTCTAGAGGTTGAGCCCAGTG 20803 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||||||||| |||||| ||| ||||||||||||||| || ||||| | Sbjct 20804 ATACTATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGCATTCCTCCTGATCAGC 20863 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||| ||||||||||| ||||| | || ||| ||||| ||| |||| ||||||| Sbjct 20864 AGCGACTTATTTTTGCAGGAAAACAGCTTGAAGATGGCAGAACATTATCAGACTATAATA 20923 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||| ||||| ||| | ||| | || | || | ||||| || Sbjct 20924 TTCAAAAGGAATCCACTCTGCATCTTGTGCTCAGACTTAGAGGTGG 20969 Score = 161 bits (178), Expect = 2e-34 Identities = 160/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 146051 ATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAA 146110 ||| |||||||| || |||||| | || || || | || |||||||| ||||||| || Sbjct 21332 ATTTACAGGAAAGACTATTACTTTAGAAGTTGAGCCTAGTGATACTATAGAAAATGTGAA 21391 Query 146111 AAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGG 146170 ||||| ||| ||||| ||||||||||| ||||| || || || |||||||| || Sbjct 21392 GGCAAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAGCAGAGGCTTATTTTTGCTGG 21451 Query 146171 TAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTAT 146230 ||||||| |||| ||| |||||| ||| ||||||| ||||||||||||||||| ||| | Sbjct 21452 TAAACAACTAGAGGATGGTAGAACATTATCAGATTACAATATACAAAAAGAATCTACTCT 21511 Query 146231 CCATTTAGTATTACGATTAAGAGGAGG 146257 ||| | || | || | |||||||| Sbjct 21512 TCATCTGGTGCTTAGACTTAGAGGAGG 21538 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||||||||| || ||||| ||||| | || ||||||| | | Sbjct 19376 TGCAAATCTTCGTTAAAACATTAACTGGTAAAACCATTACGTTAGAAGTAGAACCCAGTG 19435 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| ||| ||||| ||| ||| ||||| ||||| |||||||| | Sbjct 19436 ACACGATAGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGAATTCCTCCCGATCAGC 19495 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | || ||||||||||||||| | || ||| | | || || |||| ||||||| Sbjct 19496 AGAGGTTAATCTTTGCAGGTAAACAACTTGAAGATGGTCGCACTCTATCAGACTATAATA 19555 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| || | ||| | ||| | | |||||||| |||| Sbjct 19556 TTCAAAAAGAATCTACCCTTCATCTTGTACTTAGGTTAAGAGGTGGTA 19603 Score = 154 bits (170), Expect = 2e-32 Identities = 177/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| | || || || || ||||| |||| || |||| | | Sbjct 20288 TGCAGATTTTTGTCAAAACTCTTACTGGTAAGACCATTACACTTGAGGTGGAACCAAGTG 20347 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| ||| ||| || ||| ||||||||| ||||| || ||||||| Sbjct 20348 ACACAATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAAC 20407 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||||||||||||| ||||| || |||| ||| | | || || |||||||||| | Sbjct 20408 AGAGACTCATTTTTGCTGGTAAGCAGCTAGAAGATGGTCGCACACTATCAGATTATAACA 20467 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | ||||||||||| || | || | |||||| |||| ||||| |||| ||||||| Sbjct 20468 TTCAAAAAGAATCTACACTTCACCTTGTATTAAGATTGAGAGGTGGTATGCAAATATT 20525 Score = 132 bits (146), Expect = 8e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || |||| ||| | || || |||||||| || | || || || | | Sbjct 19604 TGCAGATCTTTGTAAAGACACTTACTGGTAAAACAATAACATTAGAGGTTGAGTCCAGTG 19663 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||||||| ||||| ||| |||||||||||| || || ||||| | Sbjct 19664 ACACAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGCATACCTCCTGATCAGC 19723 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||||||||| |||||||| |||| ||| | ||| | |||| ||||| | Sbjct 19724 AACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGGCGTACGCTTTCAGACTATAACA 19783 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| || | || || || || | ||||||||||| Sbjct 19784 TTCAAAAAGAATCTACACTGCACTTGGTTTTGAGGTTAAGAGGAGG 19829 Score = 129 bits (142), Expect = 9e-25 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || || ||||| || || | || || || | || | Sbjct 20972 TGCAAATTTTTGTTAAGACTCTTACTGGGAAAACCATAACATTAGAAGTTGAGCCTAGTG 21031 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||||||||| ||| || ||| ||||||||| |||||||| ||||||| Sbjct 21032 ATACTATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCACCTGATCAAC 21091 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||| |||||||| ||||| |||| ||| | |||| | | || || |||| Sbjct 21092 AGAGGCTCATATTTGCAGGAAAACAGCTAGAAGATGGTCGAACCCTTTCTGACTACAATA 21151 Query 146212 TACAAAAAGAATCGAC 146227 | ||||||||||| || Sbjct 21152 TCCAAAAAGAATCAAC 21167 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | |||||| | || || || || || || | || || || | || | Sbjct 18920 TGCAGATCTTTGTGAAAACACTTACTGGCAAGACCATCACATTAGAGGTTGAGCCTAGTG 18979 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| || |||||| || ||||||||| || || || || || | Sbjct 18980 ACACCATAGAAAATGTTAAGGTTAAAATTCAGGATAAAGAAGGAATCCCTCCTGACCAGC 19039 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || || ||| | || ||| | || || |||| ||||| | Sbjct 19040 AGAGGCTGATTTTTGCTGGCAAGCAACTCGAAGATGGACGTACATTGTCAGACTATAACA 19099 Query 146212 TACAAAAAGAATCGAC 146227 | || ||||||||||| Sbjct 19100 TCCAGAAAGAATCGAC 19115 >seq13140 Length=15713 Score = 95.1 bits (104), Expect = 2e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191 |||||||||||| |||||||| | | |||||||| ||||| ||||| || ||| || Sbjct 15482 AGGCATTCCACCTGATCAACAGCGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGAAG 15423 Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251 ||| ||| | || || ||||| || |||||||| || | |||||||| | || || || Sbjct 15422 AACATTATCTGACTACAATATTCAGAAAGAATCTACATTACATTTAGTTCTTCGTTTGAG 15363 Query 146252 AGGAGGT 146258 |||||| Sbjct 15362 GGGAGGT 15356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 784674511676880