Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2770 161 8e-35 >seq2770 Length=41231 Score = 161 bits (178), Expect = 8e-35 Identities = 165/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || |||||||| || |||||||| ||||| || ||||| | || || || ||| Sbjct 19358 AGAACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAAAGAGTACGTCCATCC 19299 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || ||||| || |||||| | || || | ||| ||||| || |||||||| || |||||| Sbjct 19298 TCAAGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCT 19239 Query 29695 TGTAATTTTTGTTTGACAGTT-TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || |||||| | || | ||| || | |||||| |||| ||||| |||||||| || Sbjct 19238 TG-AATTTTAGCTTTAACGTTCTCGATGGTGTCACTTTGTTCAACTTCTAGAGTTATTGT 19180 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||||||||||||||||| || |||||||| Sbjct 19179 TTTGCCAGTTAAGGTTTTAACGAAAATCTGCAT 19147 Score = 158 bits (174), Expect = 9e-34 Identities = 165/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | |||||| || |||||||||||||| ||||| || | | |||||| ||| Sbjct 19586 AGTACAAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGATAGAGTGCGACCATCT 19527 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || |||||||| || ||| | || || || |||||||| || ||||| || || || ||| Sbjct 19526 TCAAGTTGTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTATCT 19467 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || |||||||| ||| ||| |||||| |||||| |||||||||| | || || || Sbjct 19466 TG-AATTTTTGCTTTAACATTTTCTATCGTGTCACTGGGTTCTACTTCTAACGTAATGGT 19408 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| |||||||| |||||||| || || |||||| Sbjct 19407 TTTACCAGTTAATGTTTTAACGAAGATTTGCATT 19374 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || ||||| | || ||||||||||| |||||||| || | | || | ||| || Sbjct 20723 ACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGATAAAGTCCTGCCATCTTCT 20664 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || |||||| | || | | ||||||||| || ||||| || ||||| ||||| Sbjct 20663 AATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATCCCTTCTTTATCTTG- 20605 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | ||| ||| |||||| || ||| ||||||||||||||||||| ||||| Sbjct 20604 AATTTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCTACTTCAAGAGTTATTGTTTT 20545 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| |||||||| ||||| ||||| Sbjct 20544 ACCAGTTAAAGTTTTAACGAATATTTGCAT 20515 Score = 145 bits (160), Expect = 6e-30 Identities = 156/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| || ||||||||||||||||||||||| | | |||||| ||| || || || Sbjct 20489 TGAAGTGTAGATTCTTTTTGAATGTTATAATCTGATAGTGTGCGACCATCTTCTAGCTGC 20430 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || |||||| | || | ||| || ||||| || |||||||| ||||| ||||| ||| || Sbjct 20429 TTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTTATCTTG-AATCTT 20371 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | ||||||| |||| | |||||| |||| || ||||| || || || || ||||| Sbjct 20370 AGCTTTGACATTTTCAATTGTGTCACTTGGTTCCACCTCAAGTGTAATGGTCTTACCAGT 20311 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 | ||||| ||||| |||||||| Sbjct 20310 AAGAGTTTTGACAAAAATCTGCAT 20287 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| |||| |||| || | ||| | || |||||||| |||||||| || || | Sbjct 20057 CCTCCTCTCAGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGAT 19998 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || || || || |||||| | || || || || ||||| || ||| Sbjct 19997 AATGTACGACCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGGA 19938 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||||||||| |||||| | ||| ||| |||| | || ||| | | ||||| Sbjct 19937 ATTCCTTCTTTGTCTTG-AATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTAC 19879 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| | || |||||||| |||||||| || || ||||| ||||||||| Sbjct 19878 TTCTAAGGTAATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCATT 19830 Score = 132 bits (146), Expect = 4e-26 Identities = 146/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||||| |||||| || ||||||||||| || || ||||| | | || | | ||| Sbjct 21523 AGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATCTGATAATGTTCTACCATCC 21464 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || |||||||| |||||| | || | || |||||||| || ||||| |||||||||||| Sbjct 21463 TCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCTTTGTCT 21404 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || |||||||| || ||| |||||| ||| ||| | | || ||||| | ||| ||||| Sbjct 21403 TG-AATTTTTGCCTTCACATTTTCTATAGTATCACTAGGCTCAACTTCTAAAGTAATAGT 21345 Query 29754 TTTGCCAGTTAA 29765 || || || || Sbjct 21344 CTTTCCTGTAAA 21333 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| || || | || ||||| || || || |||||||||||||||||||| || | Sbjct 19830 TCCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGA 19771 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || || ||| || || ||||| |||||| | || | | ||||||||| || || Sbjct 19770 AAGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGG 19711 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || ||||| ||||| |||||||| ||| ||| |||| | |||||| || | Sbjct 19710 TATGCCTTCTTTATCTTG-AATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAA 19652 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || | ||||| ||||| ||||| | || || ||||| |||||||| Sbjct 19651 CCTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| || | ||||| || | ||||| || ||||||||||| || || || || | Sbjct 21198 TCCTCCTCTAAGCCGCAGAACAAGGTGAAGTGTTGATTCTTTTTGGATATTGTAGTCAGA 21139 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || ||| ||| ||| || || ||||| || ||| |||| | || || ||||| || || Sbjct 21138 AAGGGTTCGACCATCTTCTAGCTGTTTTCCTGCAAATATGAGCCTCTGTTGATCAGGTGG 21079 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || ||||| ||||| ||| || | || ||| |||| | ||| ||| | | || | Sbjct 21078 AATTCCTTCTTTATCTTG-AATCTTAGCCTTTACATTTTCAATAGTATCACTAGGCTCAA 21020 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| | ||||| ||||| ||||| | || |||||||| || ||||| Sbjct 21019 CTTCTAATGTTATGGTTTTCCCAGTAAGAGTCTTAACAAAAATTTGCAT 20971 Score = 113 bits (124), Expect = 3e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| || ||||| ||||||||||| || || | | || || ||| || ||||| Sbjct 20261 TGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCTAGTTGC 20202 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || |||||| |||||||||| || ||||| || || || || ||||| ||||| |||||| Sbjct 20201 TTACCAGCAAATATCAATCTCTGTTGATCAGGTGGGATTCCTTCTTTATCTTG-AATTTT 20143 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | || || |||| | ||||| | |||| ||||| | ||||| || || ||||| Sbjct 20142 AGCCTTTACGTTTTCAATGGTGTCGCTAGGTTCAACTTCTAATGTTATTGTCTTACCAGT 20083 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| || ||||| Sbjct 20082 AAGAGTCTTTACAAAGATTTGCAT 20059 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||| |||||||| || || ||||| ||||| ||||||||||| | | ||| | | Sbjct 22627 CGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCTGACAAGGTTCTGCCA 22568 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || |||||| | || | | || ||||| || ||||| |||||||| Sbjct 22567 TCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGGGGAATGCCCTCTTTA 22508 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | ||| ||| ||| | || | || ||| |||| ||||| ||||| ||| Sbjct 22507 TCCTGGATCTTTGCTTTTACATTCTCAATGGTATCACTGGGTTCAACTTCTAGAGTAATA 22448 Query 29752 GTTTTGCC 29759 ||||| || Sbjct 22447 GTTTTACC 22440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384506454675774