Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq2770 147 2e-30 seq13140 84.2 2e-11 >seq2770 Length=41231 Score = 147 bits (162), Expect = 2e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258 |||||||||||| | || ||||||||||| ||||| || || | || || || Sbjct 20727 CAAAACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGATAAAGTCCTGCCATC 20668 Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||| | ||| ||||||||| |||| |||||||||||||| ||||| || |||||||| || Sbjct 20667 TTCTAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATCCCTTCTTTATC 20608 Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378 |||||| ||| | | ||| | ||| || | ||||||||||||| ||| | || Sbjct 20607 TTGAATTTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCTACTTCAAGAGTTATTGT 20548 Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || || || || ||||| ||||||||||||||| Sbjct 20547 TTTACCAGTTAAAGTTTTAACGAATATTTGCATA 20514 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||||| ||| | |||||| || || | ||||||||||||||| ||||| || || Sbjct 19829 CCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAA 19770 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | | ||||| || |||||||||||| | || |||||||||||||| |||||| Sbjct 19769 AGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGT 19710 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 ||||||||||| || ||||||| ||||| | ||| | ||||| ||| || || Sbjct 19709 ATGCCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAACC 19650 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | || || || || | ||| ||||| || || |||||| Sbjct 19649 TCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCATA 19602 Score = 129 bits (142), Expect = 6e-25 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| ||| | | || | ||||| |||||||||||||| || || || || | Sbjct 19601 CCACCTCTTAACCTAAGTACAAGATGAAGGGTAGATTCTTTTTGAATATTATAGTC--TG 19544 Query 137245 ATTGTGCTCGAG--TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 137302 || | | ||| ||||| ||||||||||| ||| |||| | | ||||||||||||| Sbjct 19543 ATAGAGTGCGACCATCTTCAAGTTGTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAG 19484 Query 137303 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTA 137362 | || ||||| || || ||||||| ||| | | ||| | |||||| ||||||||| Sbjct 19483 GAATTCCTTCCTTATCTTGAATTTTTGCTTTAACATTTTCTATCGTGTCACTGGGTTCTA 19424 Query 137363 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| | || | || || || || |||||||| ||||| |||||||| Sbjct 19423 CTTCTAACGTAATGGTTTTACCAGTTAATGTTTTAACGAAGATTTGCAT 19375 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 137202 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTT 137260 ||||||||||| || |||||||| || || |||||||| | || | || | || | Sbjct 19356 AACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAAAGAGTACGTCCA-TCCT 19298 Query 137261 CGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGG 137320 | ||||| ||||||||| | || | |||||| ||||| || || || ||||| ||||| Sbjct 19297 CAAGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTT 19238 Query 137321 TAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCT 137380 |||||| ||| | | || | ||||| | |||| ||||| | ||| | || | Sbjct 19237 GAATTTTAGCTTTAACGTTCTCGATGGTGTCACTTTGTTCAACTTCTAGAGTTATTGTTT 19178 Query 137381 TGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| || || ||||| ||||| || ||||| Sbjct 19177 TGCCAGTTAAGGTTTTAACGAAAATCTGCAT 19147 Score = 100 bits (110), Expect = 3e-16 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 137209 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA--GTCTTCGAGTT 137266 |||| ||||||||||||||| ||||| |||| || || ||| ||| ||||| || | Sbjct 20489 TGAAGTGTAGATTCTTTTTGAATGTTATAAT--CTGATAGTGTGCGACCATCTTCTAGCT 20432 Query 137267 GTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTT 137326 | ||||||||| | || || | || ||||| ||||| || |||||||| || ||| | Sbjct 20431 GCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTTATCTTGAATCT 20372 Query 137327 TTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGG 137386 | ||| | | ||| | ||||| | ||||| || |||| || | ||||| || | Sbjct 20371 TAGCTTTGACATTTTCAATTGTGTCACTTGGTTCCACCTCAAGTGTAATGGTCTTACCAG 20312 Query 137387 TCAATGTTTTTACGAATATTTGCATA 137412 | | ||||| || || || |||||| Sbjct 20311 TAAGAGTTTTGACAAAAATCTGCATA 20286 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || ||||| ||||| || || || || | ||| || ||||| || ||||| || Sbjct 20939 GTGGATTCCTTTTGAATATTATAGTCTGATAATGTTCTGCCATCTTCAAGCTGTTTTCCT 20880 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| | || || || |||||||| ||||| ||||||||||| || |||||| ||| Sbjct 20879 GCAAAAATAAGTCGCTGCTGATCAGGAGGAATGCCTTCTTTATCTTGAATTTTAGCCTTT 20820 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | ||| | || || |||| || || || | ||| | || || || ||||| || Sbjct 20819 ACATTTTCAATAGTATCACTGGGCTCAACCTCTAGAGTTATTGTTTTACCAGTCAAGGTC 20760 Query 137395 TTTACGAATATTTGCATA 137412 |||||||||||||||||| Sbjct 20759 TTTACGAATATTTGCATA 20742 Score = 98.7 bits (108), Expect = 1e-15 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 137208 ATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTG 137267 ||||| ||||||||||||||||| |||||||| | ||| || || || ||||| Sbjct 21515 ATGAAGAGTAGATTCTTTTTGTATATTGTAATCTGATAATGTTCTACCATCCTCTAGTTG 21456 Query 137268 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 137327 |||||||||| | || || | |||||||| || || ||||| |||||||| |||||| Sbjct 21455 TTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCTTTGTCTTGAATTTT 21396 Query 137328 TTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 137387 | || | | ||| | || || | || || ||||| | ||| | ||||| || || Sbjct 21395 TGCCTTCACATTTTCTATAGTATCACTAGGCTCAACTTCTAAAGTAATAGTCTTTCCTGT 21336 Query 137388 CAAT 137391 ||| Sbjct 21335 AAAT 21332 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 137202 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTT 137260 ||| || || | ||| |||||||| || ||||| || || || ||| | || | |||| Sbjct 19128 AACCAAGTGTAGTGTCGATTCTTTCTGGATGTTATAGTCTGACAATGTACGTCCA-TCTT 19070 Query 137261 CGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGG 137320 ||||||| || |||||| | ||||| | ||||| || ||||| || |||||||| || Sbjct 19069 CGAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCTTTATCCT 19010 Query 137321 TAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCT 137380 |||||| || | | ||| | ||||| | || || || || | || | |||| Sbjct 19009 GAATTTTAACCTTAACATTTTCTATGGTGTCACTAGGCTCAACCTCTAATGTGATGGTCT 18950 Query 137381 TGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| || | |||||| || || || ||||| Sbjct 18949 TGCCAGTAAGTGTTTTCACAAAGATCTGCAT 18919 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||||| | ||||| || | ||| | ||||||||||| || |||||||| || Sbjct 20057 CCTCCTCTCAGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGAT 19998 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| | ||||| || || ||||||||| | || | | || ||||| || || Sbjct 19997 AATGTACGACCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGGA 19938 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| |||||| ||| | | ||| | || || | || |||||| Sbjct 19937 ATTCCTTCTTTGTCTTGAATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTACT 19878 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | || || || || ||||| || || || || ||||| Sbjct 19877 TCTAAGGTAATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCAT 19831 >seq13140 Length=15713 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| | ||||| | ||||||||| | |||||||||||| || || ||||| || Sbjct 15357 CCTCCCCTCAAACGAAGAACTAAATGTAATGTAGATTCTTTCTGAATATTGTAGTCAGAT 15416 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||| || ||||| | ||| ||||||||| | |||| ||| || ||||| || || Sbjct 15417 AATGTTCTTCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGCTGTTGATCAGGTGGA 15476 Query 137305 ATGCCT 137310 |||||| Sbjct 15477 ATGCCT 15482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487616902264800