Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2770 206 5e-48 seq13140 104 5e-17 seq12692 86.0 1e-11 >seq2770 Length=41231 Score = 206 bits (228), Expect = 5e-48 Identities = 182/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| | |||||||| | ||| || || |||||||| || ||||| || ||||| Sbjct 21197 CCTCCTCTAAGCCGCAGAACAAGGTGAAGTGTTGATTCTTTTTGGATATTGTAGTCAGAA 21138 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || ||| ||| |||||||| |||||||| ||||| || || || |||||||| || || Sbjct 21137 AGGGTTCGACCATCTTCTAGCTGTTTTCCTGCAAATATGAGCCTCTGTTGATCAGGTGGA 21078 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| |||||||||||||| || |||||||||||||| |||||| |||| || ||| Sbjct 21077 ATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGCTCAACT 21018 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || ||||| || || || || | ||||| ||||| || ||||| Sbjct 21017 TCTAATGTTATGGTTTTCCCAGTAAGAGTCTTAACAAAAATTTGCAT 20971 Score = 203 bits (224), Expect = 6e-47 Identities = 183/230 (80%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||||||||||| |||| || | |||| ||||||||||||||| || || || |||| Sbjct 20059 TACCTCCTCTCAGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAG 20000 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | ||| ||||| || || || |||||||| |||| || ||||||||||| | Sbjct 19999 ATAATGTACGACCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTG 19940 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | |||||||| || |||||||| || ||||| ||||||||||| |||||| |||| |||| Sbjct 19939 GAATTCCTTCTTTGTCTTGAATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTA 19880 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||| || || || || || || || || ||||| ||||| ||||||||| Sbjct 19879 CTTCTAAGGTAATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCATT 19830 Score = 199 bits (220), Expect = 8e-46 Identities = 182/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| || | || || | || || ||||||||||| || |||||||| || | Sbjct 19603 TACCACCTCTTAACCTAAGTACAAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTG 19544 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||||| | | ||| ||||| |||||||| || |||||||||| || || ||||| |||| Sbjct 19543 ATAGAGTGCGACCATCTTCAAGTTGTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAG 19484 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | |||||||||||||||||||| |||||||| |||||||| ||||| ||| | ||||||| Sbjct 19483 GAATTCCTTCCTTATCTTGAATTTTTGCTTTAACATTTTCTATCGTGTCACTGGGTTCTA 19424 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||| || || || || || || || || || || || || || |||||| Sbjct 19423 CTTCTAACGTAATGGTTTTACCAGTTAATGTTTTAACGAAGATTTGCATT 19374 Score = 197 bits (218), Expect = 3e-45 Identities = 180/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| || | || ||| |||||||| ||||||||||| || || ||||| || || Sbjct 19829 CCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAA 19770 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || |||||||| ||||| |||||||| || || | ||| ||||| |||||| Sbjct 19769 AGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGT 19710 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||| ||||||||||| |||||||||||||||||||| || ||| | | || || Sbjct 19709 ATGCCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAACC 19650 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || ||||| || || || || | ||||||||||| |||||||| Sbjct 19649 TCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 190 bits (210), Expect = 4e-43 Identities = 171/215 (80%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||||| ||| ||||||||||| || || || || || ||||| ||| | | || Sbjct 20273 CGGAGAACTAGGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCA 20214 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||||||||| || |||||||| || | ||| |||||||| || || |||||||| ||| Sbjct 20213 TCTTCTAGTTGCTTACCAGCAAATATCAATCTCTGTTGATCAGGTGGGATTCCTTCTTTA 20154 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 |||||||| || || ||||| |||||||| || || ||||||| ||||| || ||||| Sbjct 20153 TCTTGAATTTTAGCCTTTACGTTTTCAATGGTGTCGCTAGGTTCAACTTCTAATGTTATT 20094 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || | ||||||||||| || ||||| Sbjct 20093 GTCTTACCAGTAAGAGTCTTTACAAAGATTTGCAT 20059 Score = 190 bits (210), Expect = 4e-43 Identities = 170/213 (80%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 || |||||| || | ||| |||||||| || || ||||| || |||| | | || || || Sbjct 20727 CAAAACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGATAAAGTCCTGCCATC 20668 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 ||||| ||| || ||||||||||| || | ||| ||||||||||| || ||||| ||||| Sbjct 20667 TTCTAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATCCCTTCTTTATC 20608 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 |||||| || ||||| |||||||| ||||||||| | ||||||||||| | |||||| || Sbjct 20607 TTGAATTTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCTACTTCAAGAGTTATTGT 20548 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || || || || || ||||| ||||| Sbjct 20547 TTTACCAGTTAAAGTTTTAACGAATATTTGCAT 20515 Score = 188 bits (208), Expect = 1e-42 Identities = 179/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | | || | ||| || ||||||||||| || || |||||||| | Sbjct 20515 TACCACCTCTCAATCTTAATACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATCTG 20456 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 |||| | | ||| |||||||| || || |||||||| || ||||| |||||||| |||| Sbjct 20455 ATAGTGTGCGACCATCTTCTAGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAG 20396 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| |||||||||||||| ||||| ||||||||||| || ||| | ||||| | Sbjct 20395 GAATACCTTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATTGTGTCACTTGGTTCCA 20336 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || ||||| || || | || || ||||| |||||||| Sbjct 20335 CCTCAAGTGTAATGGTCTTACCAGTAAGAGTTTTGACAAAAATCTGCAT 20287 Score = 181 bits (200), Expect = 2e-40 Identities = 162/203 (80%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 |||||||| ||||| || || |||||||| || |||| |||| || ||||| || ||| Sbjct 20945 TGCAGAGTGGATTCCTTTTGAATATTATAGTCTGATAATGTTCTGCCATCTTCAAGCTGT 20886 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 ||||| ||||| || |||| || ||||| ||||| || ||||| ||||||||||| || Sbjct 20885 TTTCCTGCAAAAATAAGTCGCTGCTGATCAGGAGGAATGCCTTCTTTATCTTGAATTTTA 20826 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || |||||||||||||| |||||| | || || || || | |||||| || || || ||| Sbjct 20825 GCCTTTACATTTTCAATAGTATCACTGGGCTCAACCTCTAGAGTTATTGTTTTACCAGTC 20766 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 || |||||||| ||||| ||||| Sbjct 20765 AAGGTCTTTACGAATATTTGCAT 20743 Score = 178 bits (196), Expect = 3e-39 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| | | || || | || |||||||||||||| |||||||| ||||| ||| Sbjct 21538 CCTCCTCTAAGTCTAAGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATCTGAT 21479 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | ||||||| || ||||||||||| |||||||| || || || || |||||||| || Sbjct 21478 AATGTTCTACCATCCTCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGGA 21419 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || || |||||||| ||||| || |||||||| || |||||| |||| || ||| Sbjct 21418 ATGCCCTCTTTGTCTTGAATTTTTGCCTTCACATTTTCTATAGTATCACTAGGCTCAACT 21359 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAA 82789 || ||||| || ||||| ||||| || Sbjct 21358 TCTAAAGTAATAGTCTTTCCTGTAAA 21333 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 |||||||| || || || ||||||||||| ||||| ||||| || ||| | | || || Sbjct 19358 AGAACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAAAGAGTACGTCCATCC 19299 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||| || |||||||| |||| | ||||||||| || || || |||||||| ||| Sbjct 19298 TCAAGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCT 19239 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 ||||| || ||||| || || || || || ||| | |||| ||||| | |||||| || Sbjct 19238 TGAATTTTAGCTTTAACGTTCTCGATGGTGTCACTTTGTTCAACTTCTAGAGTTATTGTT 19179 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || || || || || |||||||| Sbjct 19178 TTGCCAGTTAAGGTTTTAACGAAAATCTGCAT 19147 Score = 156 bits (172), Expect = 8e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||| | ||||| ||||| || || ||||||||||| || ||||| || || Sbjct 19145 CCACCTCTCAGCCTAAGAACCAAGTGTAGTGTCGATTCTTTCTGGATGTTATAGTCTGAC 19086 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | || ||||| ||||| || |||||||| || || || || || || ||||| Sbjct 19085 AATGTACGTCCATCTTCGAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 19026 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| ||||| ||||| || | || |||||||| || || ||| |||| || || Sbjct 19025 ATTCCTTCTTTATCCTGAATTTTAACCTTAACATTTTCTATGGTGTCACTAGGCTCAACC 18966 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 || || || || |||||||| || | || || ||||| ||||||||| || Sbjct 18965 TCTAATGTGATGGTCTTGCCAGTAAGTGTTTTCACAAAGATCTGCATTGTT 18915 Score = 156 bits (172), Expect = 8e-33 Identities = 148/189 (78%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 |||| ||| || |||||||||||||| || || || |||||||| || | |||| || Sbjct 22627 CGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCTGACAAGGTTCTGCCA 22568 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || || || ||||||||||| || | |||||||| || || || || || ||| Sbjct 22567 TCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGGGGAATGCCCTCTTTA 22508 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||||||||||||||| ||||| |||||| | ||||| ||||| | ||| || Sbjct 22507 TCCTGGATCTTTGCTTTTACATTCTCAATGGTATCACTGGGTTCAACTTCTAGAGTAATA 22448 Query 82776 GTCTTGCCT 82784 || || ||| Sbjct 22447 GTTTTACCT 22439 >seq13140 Length=15713 Score = 104 bits (114), Expect = 5e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 |||||| |||||||| |||||||| || | |||||||||||||| ||||| || ||||| Sbjct 15356 ACCTCCCCTCAAACGAAGAACTAAATGTAATGTAGATTCTTTCTGAATATTGTAGTCAGA 15415 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || |||| || ||||| | ||| || |||||||| || | | |||||||| || || Sbjct 15416 TAATGTTCTTCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGCTGTTGATCAGGTGG 15475 Query 82703 TATTCCT 82709 || ||| Sbjct 15476 AATGCCT 15482 >seq12692 Length=15378 Score = 86.0 bits (94), Expect = 1e-11 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 198360 CAGATGATAAGAGAAGGAAAAATGCATAGTTTTTTAAGAATGTACTGGGCTAAAAAGATA 198419 || ||| | | |||||| ||||||||| | ||| || | ||||| ||||| || || ||| Sbjct 4977 CAAATGGTCAAAGAAGGGAAAATGCATGGATTTCTACGTATGTATTGGGCAAAGAAAATA 4918 Query 198420 CTTGAATGGACAAGAACACCGGAAGACGC-TTTGAGTTATAGTATCTATCTAAACAATAA 198478 ||||||||||| | | || ||||| || || ||| | | ||| ||||| || |||| Sbjct 4917 CTTGAATGGACTAACAGTCCTGAAGAGGCATTGGAGAT-TGCTATTTATCTCAATGATAA 4859 Query 198479 GTACGAACTAGACGGCACGGATCCTAACGGATACGTAGG 198517 || ||| | || || || |||||||| || ||||| Sbjct 4858 ATATGAATTGGATGGTCGTGACCCTAACGGTTATGTAGG 4820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 979917431344946