Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq7048 98.7 2e-15 seq12692 95.1 2e-14 seq2770 86.0 1e-11 >seq7048 Length=18638 Score = 98.7 bits (108), Expect = 2e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| | ||||||||||||||| ||| | || ||| | |||| | |||||| | Sbjct 622 GATAGCAAAAGCATTATGGTGGTATTATTTTTCAAAACTCTTGGAATTTTGTGATACATT 681 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 ||||| || | | |||||| |||||| ||| |||||| ||| |||||||||||| Sbjct 682 CTTTTTTATTTTGCGTAAAAAGAATAATCAACTTACCTTTCTCCACATATATCATCATTC 741 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGG 58525 |||||||||| | | | ||| | ||| | |||||| Sbjct 742 TACTATGTTTGGTCTTTGGTGGATTGGTGTGAAATGG 778 >seq12692 Length=15378 Score = 95.1 bits (104), Expect = 2e-14 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 183043 CAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATA 183102 || ||| | | |||||| ||||||||| | ||| |||| ||||| ||||| || || ||| Sbjct 4977 CAAATGGTCAAAGAAGGGAAAATGCATGGATTTCTACGTATGTATTGGGCAAAGAAAATA 4918 Query 183103 CTTGAATGGACAAGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTATATGAACAATAA 183161 ||||||||||| | | ||| ||||| || || ||| | | ||| ||| | || |||| Sbjct 4917 CTTGAATGGACTAACAGTCCTGAAGAGGCATTGGAGAT-TGCTATTTATCTCAATGATAA 4859 Query 183162 GTACGAACTAGACGGTACGGATCCTAACGGATACGTAGG 183200 || ||| | || ||| || |||||||| || ||||| Sbjct 4858 ATATGAATTGGATGGTCGTGACCCTAACGGTTATGTAGG 4820 >seq2770 Length=41231 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/137 (73%), Gaps = 11/137 (8%) Strand=Plus/Minus Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA------- 81696 || ||| |||| || || |||||||| || |||||||| | || ||||| | Sbjct 19574 AGGGTAGATTCTTTTTGAATATTATAGTCTGATAGAGTGCGACCATCTTCAAGTTGTTTA 19515 Query 81697 ----CAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752 ||||||||| || || ||| | ||| | ||| |||||||||||||||| |||||| Sbjct 19514 CCTGCAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTATCTTGAATTTTTGCT 19455 Query 81753 TTTATATTTTCAATCGT 81769 || | |||||| ||||| Sbjct 19454 TTAACATTTTCTATCGT 19438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 901696819151040