Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq12781 143 4e-29 seq362 141 1e-28 seq46691 109 8e-19 seq12719 109 8e-19 seq49585 105 9e-18 seq64549 102 1e-16 seq113158 91.5 2e-13 seq86949 87.8 3e-12 seq21197 87.8 3e-12 seq4732 87.8 3e-12 seq17508 84.2 3e-11 >seq12781 Length=13708 Score = 143 bits (158), Expect = 4e-29 Identities = 227/321 (71%), Gaps = 11/321 (3%) Strand=Plus/Plus Query 60881 TGATATCCAGGATGCAATATCAAGGATAAGTTCCTTGCGAACATACTGGCCAGTAATTTG 60940 |||||||||||| || |||||||||||||||||||| || |||||||| || || || || Sbjct 11025 TGATATCCAGGAGGCGATATCAAGGATAAGTTCCTTTCGGACATACTGACCTGTTATCTG 11084 Query 60941 TTTATTAATTTCGTCATTGTTCGTTAATTTCACTTCGTAAAAGCTGGCGCTCATAAATGA 61000 || || | | ||||| || ||| | |||||||||||| | | | || | Sbjct 11085 CTTGTTGAGAGAATAGTTGTTTTATAGTTTGATCTCGTAAAAGCTGACTCG-AGAATT-- 11141 Query 61001 GCGCCAGCTTTTACT--TTGATAATGTTCCAA--CAATTTTTTGGATTTTTCCAGACGAG 61056 | |||| | | | | || | || | ||||| | | ||| || || | Sbjct 11142 -CTCCAGGCACTCCAGGTAGCTATAATACCTAAGCAATTGTCTAGATCTTGAAAGTTTTG 11200 Query 61057 ACCAATTCGTAAA---tttttttCCTCCATAATTGCAGAGTTTGGTTGCATTAAAACAAC 61113 |||| | | ||| ||| |||| | || || ||||| |||||||||||||||| Sbjct 11201 ACCAGTCTGCAAACCTTTTATTTCGGCTCAAACCACATAGTTTTGTTGCATTAAAACAAC 11260 Query 61114 CTGTGTTCTTATCAACAACCAACTTAAAGTCTCCAAATAGCCCATAGTAAAAGTTGTCTT 61173 | || ||| | || | ||||||||||||||| |||||||||||||||||||| || || | Sbjct 11261 CCGTATTCCTGTCTATAACCAACTTAAAGTCACCAAATAGCCCATAGTAAAATTTATCCT 11320 Query 61174 TAATATGTTCATAACATATAT 61194 | || || ||||||||||||| Sbjct 11321 TGATTTGCTCATAACATATAT 11341 Score = 113 bits (124), Expect = 6e-20 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 116909 CAAAGTTTGGTGGCATTAAAATATCCCGTCTCCTTATCGACAACCAACTTAAAGTCTCCA 116968 || ||||| || ||||||||| | ||||| | | | || | ||||||||||||||| ||| Sbjct 11236 CATAGTTTTGTTGCATTAAAACAACCCGTATTCCTGTCTATAACCAACTTAAAGTCACCA 11295 Query 116969 AATATCCCATGGTGGAAATTATCCTTGATTTGTTCATAACATATATCATTCAACGAT 117025 |||| ||||| || || |||||||||||||| ||||||||||||| |||| ||| Sbjct 11296 AATAGCCCATAGTAAAATTTATCCTTGATTTGCTCATAACATATATGGATCAAAGAT 11352 >seq362 Length=119548 Score = 141 bits (156), Expect = 1e-28 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 85276 CGCACCGTGCTCGGAAATATAAACTGCCTTACCTTCATGATAAGAAAGGTCTGCAAAGGA 85335 ||||||||| || || ||||||| || || ||||||||| | | || ||| | Sbjct 116599 CGCACCGTGTTCAGAGATATAAATAGCTTTCTTTTCATGATATGTTAACTCATTAAAAGG 116658 Query 85336 CCATAAAGAGTTGGGACACCCGGTGGGTCCCAACT-TTCGAAGATCTTCAAGCGTTATTT 85394 ||||||| ||||||||||| | | |||| |||||| |||| || || | | | | || Sbjct 116659 CCATAAACAGTTGGGACACTCTGAGGGTTCCAACTGTTCG-AGTTCAGCTAAAGAGAGTT 116717 Query 85395 TATGCTTTGTTTTAACATTAGTTAACAAGGtttttttCGAATTTTGATATCCAAGGGCCT 85454 |||| || ||||||||||| ||||| || | ||||| |||||| ||||| ||||||| Sbjct 116718 TATGTTTAGTTTTAACATTTGTTAATAATGCCTTTTTTACATTTTGGTATCCGAGGGCCT 116777 Query 85455 CACACATCTCCTTACCTGAGAACCA 85479 ||||||||||||| || |||||||| Sbjct 116778 CACACATCTCCTTGCCCGAGAACCA 116802 >seq46691 Length=5119 Score = 109 bits (120), Expect = 8e-19 Identities = 113/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 61057 ACCAATTCGTAAAtttttttCCTCCATAATTGCAGAGTTTGGTTGCATTAAAACAACCTG 61116 |||||||| ||||| | || |||||| | || || ||||| || ||||||||| | |||| Sbjct 320 ACCAATTCCTAAATCTCTTACCTCCAGATTTACAAAGTTTAGTAGCATTAAAATATCCTG 261 Query 61117 TGTTCTTATCAACAACCAACTTAAAGTCTCCAAATAGCCCATAGTAAAAGTTGTCTTTAA 61176 | | |||||| | | ||| ||||| ||||||||||| ||||| ||| | | ||||| | Sbjct 260 TTTCCTTATCTATTATCAATTTAAAATCTCCAAATAGTCCATATTAATAACTATCTTTTA 201 Query 61177 TATGTTCATAACATATATCATTCAACAA 61204 | || || ||||| || || || || || Sbjct 200 TTTGCTCGTAACAAATTTCTTTTAATAA 173 Score = 105 bits (116), Expect = 9e-18 Identities = 121/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 116878 ccaatttctgaattttttGCCACCATCTTTGCAAAGTTTGGTGGCATTAAAATATCCCGT 116937 |||||| || ||| | || || ||| ||| |||||||| || |||||||||||||| || Sbjct 319 CCAATTCCTAAATCTCTTACCTCCAGATTTACAAAGTTTAGTAGCATTAAAATATCCTGT 260 Query 116938 CTCCTTATCGACAACCAACTTAAAGTCTCCAAATATCCCATGGTGGAAATTATCCTTGAT 116997 |||||||| | | ||| ||||| |||||||||| |||| | || |||| || || Sbjct 259 TTCCTTATCTATTATCAATTTAAAATCTCCAAATAGTCCATATTAATAACTATCTTTTAT 200 Query 116998 TTGTTCATAACATATATCATTCAACGATGCCATTGTTTTTATA 117040 ||| || ||||| || || || || | |||| | |||||| Sbjct 199 TTGCTCGTAACAAATTTCTTTTAATAAACTCATTTTATTTATA 157 >seq12719 Length=14537 Score = 109 bits (120), Expect = 8e-19 Identities = 92/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 61089 CAGAGTTTGGTTGCATTAAAACAACCTGTGTTCTTATCAACAACCAACTTAAAGTCTCCA 61148 || ||||| |||||| ||||||||| || |||||||| | |||||| ||||||| ||| Sbjct 11194 CATAGTTTTGTTGCAATAAAACAACACGTATTCTTATCTATAACCAAAGTAAAGTCACCA 11253 Query 61149 AATAGCCCATAGTAAAAGTTGTCTTTAATATGTTCATAACATATATCATTCAA 61201 |||| ||||||||||||| | || || || || | |||||||||||| |||| Sbjct 11254 AATACCCCATAGTAAAAGCTATCCTTGATTTGCTTATAACATATATCGATCAA 11306 Score = 98.7 bits (108), Expect = 1e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 116909 CAAAGTTTGGTGGCATTAAAATATCCCGTCTCCTTATCGACAACCAACTTAAAGTCTCCA 116968 || ||||| || ||| ||||| | | ||| | |||||| | |||||| ||||||| ||| Sbjct 11194 CATAGTTTTGTTGCAATAAAACAACACGTATTCTTATCTATAACCAAAGTAAAGTCACCA 11253 Query 116969 AATATCCCATGGTGGAAATTATCCTTGATTTGTTCATAACATATATCATTCAACGAT 117025 |||| ||||| || || ||||||||||||| | |||||||||||| |||| ||| Sbjct 11254 AATACCCCATAGTAAAAGCTATCCTTGATTTGCTTATAACATATATCGATCAAAGAT 11310 >seq49585 Length=5724 Score = 105 bits (116), Expect = 9e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 61089 CAGAGTTTGGTTGCATTAAAACAACCTGTGTTCTTATCAACAACCAACTTAAAGTCTCCA 61148 || ||||| || | ||||||||||| || ||| | | | ||||||||||||||| ||| Sbjct 3134 CATAGTTTTCTTACGTTAAAACAACCCGTATTCCTGTGTATAACCAACTTAAAGTCACCA 3193 Query 61149 AATAGCCCATAGTAAAAGTTGTCTTTAATATGTTCATAACATATATCATTCAA 61201 |||| ||||||||||||||| || || | || |||||||||||||| |||| Sbjct 3194 AATAACCCATAGTAAAAGTTATCATTGAATTGCTCATAACATATATCCATCAA 3246 Score = 87.8 bits (96), Expect = 3e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 116924 TTAAAATATCCCGTCTCCTTATCGACAACCAACTTAAAGTCTCCAAATATCCCATGGTGG 116983 |||||| | ||||| | | | | | ||||||||||||||| ||||||| ||||| || Sbjct 3149 TTAAAACAACCCGTATTCCTGTGTATAACCAACTTAAAGTCACCAAATAACCCATAGTAA 3208 Query 116984 AAATTATCCTTGATTTGTTCATAACATATATCATTCAA 117021 || ||||| |||| ||| |||||||||||||| |||| Sbjct 3209 AAGTTATCATTGAATTGCTCATAACATATATCCATCAA 3246 >seq64549 Length=3824 Score = 102 bits (112), Expect = 1e-16 Identities = 126/171 (74%), Gaps = 1/171 (1%) Strand=Plus/Minus Query 61031 CAATTTTTTGGATTTTTCCAGACGAGACCAATTCGTAAAtttttttCCTCCATAATTGCA 61090 ||||||||| || || |||| | ||||| ||||||||||||| |||| || || Sbjct 3109 CAATTTTTTAGACTTCTCCAAGGTTGTCCAATGTTTAAATTTTTTTCCACCATTGTTACA 3050 Query 61091 GAGTTTGGTTGCATTAAAACAACCTGTGTTCTTATCAACAACCAACTTAAAGTCTCCAAA 61150 ||||| || ||||| || ||||| || | || |||| |||| ||||| | ||| Sbjct 3049 AAGTTTAGTCGCATTGAAGCAACCAGTTTCTTTGTCAATCACCAGTCGGAAGTCAC-AAA 2991 Query 61151 TAGCCCATAGTAAAAGTTGTCTTTAATATGTTCATAACATATATCATTCAA 61201 | ||||||||||||||| | || || || |||||||||||||| |||| Sbjct 2990 CAACCCATAGTAAAAGTTCCCCTTGATTTGCTCATAACATATATCGATCAA 2940 Score = 95.1 bits (104), Expect = 2e-14 Identities = 126/174 (72%), Gaps = 1/174 (1%) Strand=Plus/Minus Query 116852 aacttttttgatttttctaacacagtccaatttctgaattttttGCCACCATCTTTGCAA 116911 || ||||| || || || || ||||||| | | |||||||| ||||||| || ||| Sbjct 3108 AATTTTTTAGACTTCTCCAAGGTTGTCCAATGTTTAAATTTTTTTCCACCATTGTTACAA 3049 Query 116912 AGTTTGGTGGCATTAAAATATCCCGTCTCCTTATCGACAACCAACTTAAAGTCTCCAAAT 116971 ||||| || ||||| || | || || || || || | |||| ||||| | ||| Sbjct 3048 AGTTTAGTCGCATTGAAGCAACCAGTTTCTTTGTCAATCACCAGTCGGAAGTCAC-AAAC 2990 Query 116972 ATCCCATGGTGGAAATTATCCTTGATTTGTTCATAACATATATCATTCAACGAT 117025 | ||||| || || || |||||||||| |||||||||||||| |||| ||| Sbjct 2989 AACCCATAGTAAAAGTTCCCCTTGATTTGCTCATAACATATATCGATCAAAGAT 2936 >seq113158 Length=4179 Score = 91.5 bits (100), Expect = 2e-13 Identities = 125/173 (72%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 60776 TTCAATTTCTTTAATTTTCTTTTCAAGG--ATTGCCTTGTCCATTGTCTGAAACTGACTA 60833 ||| |||||||| | ||| ||||| ||| |||||||| || | | ||| | Sbjct 1200 TTCGATTTCTTTGAGTTTTAGTTCAAACTCATTT--TTGTCCATCGTTTTATACTCTTTC 1257 Query 60834 ACAAAATAGTCGAGAATCACACTATTGCACTTATCATAGAACTCGACTGATATCCAGGAT 60893 ||||| |||| ||| || ||||| ||||||| || || || || |||||||||||||| Sbjct 1258 ACAAAGTAGTTGAGGATGACACTGCTGCACTTGTCGTAAAATTCAACTGATATCCAGGAG 1317 Query 60894 GCAATATCAAGGATAAGTTCCTTGCGAACATACTGGCCAGTAATTTGTTTATT 60946 ||||| || || || ||||| | | ||| ||||| || || || || || || Sbjct 1318 GCAATGTCGAGTATTAGTTCTTGTCTAACGTACTGACCTGTTATCTGCTTGTT 1370 >seq86949 Length=4181 Score = 87.8 bits (96), Expect = 3e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 61094 TTTGGTTGCATTAAAACAACCTGTGTTCTTATCAACAACCAACTTAAAGTCTCCAAATAG 61153 ||| || | ||||||| |||| || ||| | || | || ||| |||||||| ||||||| Sbjct 4004 TTTTGTAGTATTAAAAAAACCCGTATTCCTGTCTATAATCAATTTAAAGTCACCAAATAA 3945 Query 61154 CCCATAGTAAAAGTTGTCTTTAATATGTTCATAACATATAT 61194 ||||||||||||||| || || || || ||||| |||| || Sbjct 3944 CCCATAGTAAAAGTTATCCTTGATTTGCTCATAGCATACAT 3904 Score = 84.2 bits (92), Expect = 3e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 116914 TTTGGTGGCATTAAAATATCCCGTCTCCTTATCGACAACCAACTTAAAGTCTCCAAATAT 116973 ||| || | ||||||| | ||||| | | | || | || ||| |||||||| ||||||| Sbjct 4004 TTTTGTAGTATTAAAAAAACCCGTATTCCTGTCTATAATCAATTTAAAGTCACCAAATAA 3945 Query 116974 CCCATGGTGGAAATTATCCTTGATTTGTTCATAACATATAT 117014 ||||| || || |||||||||||||| ||||| |||| || Sbjct 3944 CCCATAGTAAAAGTTATCCTTGATTTGCTCATAGCATACAT 3904 >seq21197 Length=10673 Score = 87.8 bits (96), Expect = 3e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 60777 TCAATTTCTTTAATTTTCTTTTCAAGGATTGCCTTGTCCATTGTCTGAAACTGACTAACA 60836 ||||||||||| | ||| ||||| | | |||||| || | | | | | | ||| Sbjct 5453 TCAATTTCTTTCAGCTTCAGTTCAAAAACACTTTCGTCCATCGTATTATATTCATTCACA 5394 Query 60837 AAATAGTCGAGAATCACACTATTGCACTTATCATAGAACTCGACTGATATCCAGGATGCA 60896 |||| || ||| || | | || | || || || || ||||||||||||||||| || Sbjct 5393 AAATTGTTGAGGATGATGTTGCTGTATTTGTCGTACAATTCGACTGATATCCAGGAGGCG 5334 Query 60897 ATATCAAGGATAAGTTCCTTGCGAACATACTGGCCAGTAAT 60937 ||||||||||||||||| || || | |||||| || || || Sbjct 5333 ATATCAAGGATAAGTTCGTTACGGATATACTGACCTGTTAT 5293 >seq4732 Length=46449 Score = 87.8 bits (96), Expect = 3e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 127480 AGCAAAACCGTCAGATGTTTGGGCTATAGGAGTTATTTTTTATACAATGCTTTACGGACA 127539 || |||||| ||| | ||||| |||||||| | ||| ||| ||| | || || || Sbjct 5726 AGGAAAACCAAGTGATATGTGGGCATTAGGAGTTGTACTTTTTACTATGTTATATGGTCA 5667 Query 127540 ATTTCCATTTTATGACTCTAAACCAAAAGAATTGTTTAGAAAAATTAAAGCAG 127592 |||||| ||||| || |||| ||| ||||||| ||||||||||| ||||||| Sbjct 5666 ATTTCCTTTTTACGATTCTATACCTCAAGAATTATTTAGAAAAATAAAAGCAG 5614 >seq17508 Length=14092 Score = 84.2 bits (92), Expect = 3e-11 Identities = 111/152 (73%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 60777 TCAATTTCTTTAATTTTCTTTTCAAGGATTGCCTTGTCCATTGTCTGAAACTGACTAACA 60836 ||||||||||| | ||| ||||| | |||||||||| || | | | | ||| Sbjct 13940 TCAATTTCTTTGAGCTTCAGTTCAAAAACGT--TTGTCCATTGCCTTATATTCGATCACA 13997 Query 60837 AAATAGTCGAGAATCACACTATTGCACTTATCATAGAACTCGACTGATATCCAGGATGCA 60896 || |||| ||| || | || || |||| || || || || ||| |||||||||| | | Sbjct 13998 AATTAGTTGAGGATAATGCT--TGTACTTGTCGTAAAATTCAACTAATATCCAGGAGGTA 14055 Query 60897 ATATCAAGGATAAGTTCCTTGCGAACATACTG 60928 |||||||||||||||||||| | | |||||| Sbjct 14056 ATATCAAGGATAAGTTCCTTATGGAGATACTG 14087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 703245331594080