Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2770 114 8e-21 seq13140 82.4 5e-11 >seq2770 Length=41231 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||| || | || || || |||||||| ||||| ||||| || Sbjct 20514 ACCACCTCTCAATCTTAATACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATCTGA 20455 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||||| | || || | || || || |||||||| | | ||| ||||| | || Sbjct 20454 TAGTGTGCGACCATCTTCTAGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGG 20395 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||| || | || |||| || | ||||| |||| ||||| Sbjct 20394 AATACCTTCTTTATCTTGAATCTT-AGCTTTGACATTTTCAATTGTGTCACTTGGTTCCA 20336 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || || ||||| || | ||||| ||||| ||||||||| Sbjct 20335 CCTCAAGTGTAATGGTCTTACCAGTAAGAGTTTTGACAAAAATCTGCATA 20286 Score = 109 bits (120), Expect = 4e-19 Identities = 171/241 (71%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || || ||||| || | || ||||| || || || |||||||| ||| Sbjct 19841 AAAATCTGCATTCCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATG 19782 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 || || || || || || || | || || | ||||| || |||||||| | ||| ||| Sbjct 19781 TTATAGTCTGAAAGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGC 19722 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTC 33689 ||||| | || | |||||||| || |||||| || || |||| ||| ||||| Sbjct 19721 TGATCAGGAGGTATGCCTTCTTTATCTTGAATTTT-TGCTTTTACATTTTCAATTGTGTC 19663 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || || || | || || |||||||| || | || ||||||||||||||||| Sbjct 19662 ACTGGACTCAACCTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Query 33750 A 33750 | Sbjct 19602 A 19602 Score = 102 bits (112), Expect = 5e-17 Identities = 171/244 (70%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || |||||||||| | | ||||| ||||| || ||||| || ||| Sbjct 19157 AAAATCTGCATGCCACCTCTCAGCCTAAGAACCAAGTGTAGTGTCGATTCTTTCTGGATG 19098 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 || || || || | ||| ||| | || || | ||| || || |||||||||| | |||| Sbjct 19097 TTATAGTCTGACAATGTACGTCCATCTTCGAGTTGCTTGCCAGCAAAAATCAGCCTCTGC 19038 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || || | || | |||||||| || |||||| || ||||| || | |||||| Sbjct 19037 TGGTCAGGAGGGATTCCTTCTTTATCCTGAATTTTAACCTT-AACATTTTCTATGGTGTC 18979 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || || | ||||| || || || || | ||||| |||||||||||||| Sbjct 18978 ACTAGGCTCAACCTCTAATGTGATGGTCTTGCCAGTAAGTGTTTTCACAAAGATCTGCAT 18919 Query 33750 AGTT 33753 ||| Sbjct 18918 TGTT 18915 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||||| || || || | ||| | ||| ||||| || |||||||| || || Sbjct 20058 ACCTCCTCTCAGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGA 19999 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || | || || | || || || |||||||| || | ||| |||||| | || Sbjct 19998 TAATGTACGACCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGG 19939 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| |||||| | || ||||| || | || || || | || | Sbjct 19938 AATTCCTTCTTTGTCTTGAATTTT-AGCTTTAACATTTTCAATTGTATCACTAGGCTCTA 19880 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || ||||| || ||||| || || ||||| |||||||| Sbjct 19879 CTTCTAAGGTAATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCAT 19831 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || ||||| |||||||| || || || || || | || || | ||| || || ||||| Sbjct 20249 TCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAAT 20190 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 ||||| | ||| ||||| | || | |||||||| || |||||| || | | | Sbjct 20189 ATCAATCTCTGTTGATCAGGTGGGATTCCTTCTTTATCTTGAATTTTAGCCTTTA-CGTT 20131 Query 33679 GTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| ||||||||| | ||| || || | || || || ||||| || | || ||||| Sbjct 20130 TTCAATGGTGTCGCTAGGTTCAACTTCTAATGTTATTGTCTTACCAGTAAGAGTCTTTAC 20071 Query 33738 AAAGATCTGCATA 33750 |||||| |||||| Sbjct 20070 AAAGATTTGCATA 20058 >seq13140 Length=15713 Score = 82.4 bits (90), Expect = 5e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||| || |||||||| | || ||||||| || ||||| || || ||||| || | Sbjct 15355 CACCTCCCCTCAAACGAAGAACTAAATGTAATGTAGATTCTTTCTGAATATTGTAGTCAG 15414 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATC 33635 | | ||| | | | || |||||||| || || ||||||||||||||||| ||||| Sbjct 15415 ATAATGTTCTTCCATCTTCCAATTGCTTACCAGCAAAAATCAAACGCTGTTGATC 15469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328095820970880