Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2770 104 6e-17 >seq2770 Length=41231 Score = 104 bits (114), Expect = 6e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| || || || || || || || | || |||||| |||| Sbjct 20290 CAGATTTTTGTCAAAACTCTTACTGGTAAGACCATTACACTTGAGGTGGAACCAAGTGAC 20349 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | ||| || ||||| || ||||||||| |||||||| ||| || || || Sbjct 20350 ACAATTGAAAATGTCAAAGCTAA-GATTCAAGATAAAGAAGGTATTCCTCCTGATCAACA 20408 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||||| || || || || |||||| | |||||||| | || | | ||||| ||| | Sbjct 20409 GAGACTCATTTTTGCTGGTAAGCAGCTAGAAGATGGTCGCACACTATCAGATTATAACAT 20468 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || ||||| ||||| ||||||||||| || ||| Sbjct 20469 TCAAAAAGAATCTACACTTCACCTTGTATTAAGA 20502 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || ||||| || || || ||||| || | ||| || | ||| Sbjct 20986 AAGACTCTTACTGGGAAAACCATAACATTAGAAGTTGAGCCTAGTGATACTATTGAAAAT 21045 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||||||||| |||||||||||| || || || || || || || Sbjct 21046 GTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCACCTGATCAACAGAGGCTCATATTT 21105 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||| ||| | |||||||| | || | | || ||||| |||| ||||| || Sbjct 21106 GCAGGAAAACAGCTAGAAGATGGTCGAACCCTTTCTGACTACAATATCCAAAAAGAATCA 21165 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || |||||||||||| || | ||| || Sbjct 21166 ACACTTCACCTTGTTCTGCGGCTTAGA 21192 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||| |||||| | || |||||||| || || |||| ||||| || | ||| || Sbjct 22633 CGAAGTCGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCTGACAAGGTT 22574 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 || ||||||||||||||||| || || |||||||| || |||||| Sbjct 22573 CTGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGA 22529 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 206180 TTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTC 206238 |||| ||| || || || || || || || || || ||||| ||| | ||||| | Sbjct 20068 TTTGTAAAGACTCTTACTGGTAAGACAATAACATTAGAAGTTGAACCTAGCGACACCATT 20127 Query 206239 GAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTT 206298 ||| |||||| || |||||||| ||||||||||| || || || ||| | Sbjct 20128 GAAAACGTAAAGGCTAAAATTCAAGATAAAGAAGGAATCCCACCTGATCAACAGAGATTG 20187 Query 206299 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 206358 || || || || ||||| | |||||||| | ||| || | || |||||| | || || Sbjct 20188 ATATTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTGTCTGACTACAACATTCAAAAG 20247 Query 206359 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || |||||||||||||| ||| | | ||||| Sbjct 20248 GAATCTACTCTTCACCTAGTTCTCCGGCTTCG 20279 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || ||||| || || || ||||| || | ||| Sbjct 19834 CAGATTTTTGTGAAGACATTAACTGGGAAAACTATTACCTTAGAAGTAGAGCCTAGTGAT 19893 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | ||| || ||||| ||| |||||||| |||||||||||| || || || Sbjct 19894 ACAATTGAAAATGTTAAAGCTAAA-ATTCAAGACAAAGAAGGAATTCCACCAGATCAACA 19952 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || | || || || || |||||| | |||||||| | || || | || |||||| | Sbjct 19953 GAGGTTAATTTTTGCTGGTAAGCAGCTTGAAGATGGTCGTACATTATCTGACTACAACAT 20012 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 |||||||| |||||| | || || || ||| |||| Sbjct 20013 TCAGAAAGAATCTACTTTGCATCTCGTCTTGCGACT 20048 Score = 87.8 bits (96), Expect = 4e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 |||||||| || || ||||| ||||| || | ||| || | ||| || ||| | Sbjct 21336 ACAGGAAAGACTATTACTTTAGAAGTTGAGCCTAGTGATACTATAGAAAATGTGAAGGCA 21395 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || |||||||| ||||| || ||| || || || || ||||| || || || || Sbjct 21396 AAAATTCAAGACAAAGAGGGCATTCCACCAGATCAGCAGAGGCTTATTTTTGCTGGTAAA 21455 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | || ||||| || || || | |||||||| | || ||||| ||||||||||| Sbjct 21456 CAACTAGAGGATGGTAGAACATTATCAGATTACAATATACAAAAAGAATCTACTCTTCAT 21515 Query 206374 CTTGTTTTGAGACTTCGA 206391 || || | |||||| || Sbjct 21516 CTGGTGCTTAGACTTAGA 21533 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || || || || ||||| || || || || | |||| Sbjct 18922 CAGATCTTTGTGAAAACACTTACTGGCAAGACCATCACATTAGAGGTTGAGCCTAGTGAC 18981 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| || ||||| || ||||||||||| || ||| || Sbjct 18982 ACCATAGAAAATGTTAAGGTTAAAATTCAGGATAAAGAAGGAATCCCTCCTGACCAGCAG 19041 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || || || || || ||||| | ||||||||| | || ||| | || || ||| || Sbjct 19042 AGGCTGATTTTTGCTGGCAAGCAACTCGAAGATGGACGTACATTGTCAGACTATAACATC 19101 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 |||||||| || || || ||| | ||| | || || Sbjct 19102 CAGAAAGAATCGACACTACACTTGGTTCTTAGGCT 19136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179522020418694