Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_025457.1 Length=42654 Score E Sequences producing significant alignments: (Bits) Value seq3139 134 4e-27 >seq3139 Length=44538 Score = 134 bits (148), Expect = 4e-27 Identities = 236/338 (70%), Gaps = 12/338 (4%) Strand=Plus/Plus Query 12944 AGTAAGCCTAACATGCAGAATATTCCTCGTGATGGTACATCTAAAGTTAAGGAGATGTTT 13003 || || || ||| | ||||| | || || ||||| || || || |||||| ||||||| Sbjct 26929 AGCAACCCGAACCTCCAGAACCTCCCACGAGATGGGACGTCCAAGGTTAAGCAGATGTTC 26988 Query 13004 AGCTCACGCTTTGGTGTTAATGGACGTATCGTTGAGGTCGATTATTCTGCTCTTGAAGTT 13063 | | || || |||| || || || ||| ||||||| ||||| || || || |||||| Sbjct 26989 ACCAGCCGATTCGGTGAGAACGGTCGCATCATTGAGGTGGATTACTCCGCACTGGAAGTT 27048 Query 13064 GTA--GCCCTAGCCAGTATCTCAGGTGATAAGAACTTGATGCGGATGCTGATTGAGGGTA 13121 ||| || || | || || | |||| | ||||| || | ||| | ||| | Sbjct 27049 GTAATGCTCTGTGCG--ATGACACGGGATATGGACTTGCTGGCG---CTGTTACAGGCTG 27103 Query 13122 TC---GACATGCACTGTTATCGTCTAGCTGCAAAG-CTTGGTGAAGACTATGAAAGTGTA 13177 | ||||||||||| ||||| || || | | | || || ||| || || ||| Sbjct 27104 ACACTGACATGCACTGCTATCGACTGGC-GTACCGCCTGGGCGAATCGTACGAGGATGTG 27162 Query 13178 TTCGAGAAATGCCACAACAAAGAACACCCTGAGCATAAGCAATACAAGCAATGGCGTACA 13237 | |||||| ||||||||| |||||||||| ||||| ||| | |||||||| ||| || Sbjct 27163 TACGAGAAGTGCCACAACGAAGAACACCCGGAGCACAAGAAGTACAAGCAGATGCGAACG 27222 Query 13238 GATATTAAACCTCGTGCCTTTGCTCACCAATATGGTGC 13275 |||||||| || | | |||||| |||| || ||||| Sbjct 27223 GATATTAAGCCGCTGTCATTTGCTGACCAGTACGGTGC 27260 Score = 89.7 bits (98), Expect = 1e-13 Identities = 416/650 (64%), Gaps = 18/650 (3%) Strand=Plus/Plus Query 40573 GAGTTCGCTGAGTTGGGTATGCGATACCTTGGCTTTAAGCTATCTATGATTCAAGAAGAC 40632 || || || ||| |||| ||||| | ||| ||||| | || | || ||| || Sbjct 8410 GACTTTGCGGAGCTGGGGATGCGCTTCCTCGGCTTCGAACTCACGCCAATGCAAAGGGAT 8469 Query 40633 ATTGCAGAGTTCATGCAGCATGGGCAAGCTAAGCGTATGATTCAAGCTCAGCGTGGTCAA 40692 ||||| || |||||||||||| | | || | ||| | || |||||||| | Sbjct 8470 ATTGCTTGGTACATGCAGCATGGCCCAAGGAACAGCATGGTGGCGGCACAGCGTGGGGAG 8529 Query 40693 GCTAAATCGACCCTAGCTGCTTTGTACTGTATTTGGCTTCTTATCATAAACCCGACTGCC 40752 || || || ||||| ||||| ||| | | | ||| |||||| ||| | | Sbjct 8530 GCCAAGTCCACCCTGGCTGCGCTGTTCGCTGTGTGGAACCTTATCCGTGACCAATCCTAC 8589 Query 40753 CGTACACTTATTGTGTCAGGTGGTGAGAAGCAGGCATCTGATGTTGCATTGCTTATTATC 40812 || ||| ||||| || ||||||||| |||||| || || |||||| || | ||||| Sbjct 8590 CGGGTACTGATTGTCTCCGGTGGTGAGGCGCAGGCGTCCGACGTTGCACTGTTAGTTATC 8649 Query 40813 CGAATTATTAATAACTGGTCTATCCTCTGTTGGTTACGCCCTGATGCGTCCAAAGGTGAT 40872 ||||| ||| | | ||| | || || |||||||| || || || ||||| Sbjct 8650 CGAATGATTGAGCAGTGGGGCTTGCTATGCTGGTTACGGCCAGACAGCACCCGTGGTGAC 8709 Query 40873 AGAACTTCGGCTAGTGCG---TTCGACGTACACTACAGCCTAAAAGGTATTGATAAGTCT 40929 | || ||| || ||| | |||||||||| | ||| || | ||||| || Sbjct 8710 CGTACATCG--TA-CGCGAACTATGACGTACACTGCGACCTGAAGCCCCTGGATAAATCC 8766 Query 40930 GCGTCTGTATCTTGTGTTGGTATTACAGCTAACTTACAGGGTATGCGTGCAGA-CT--TT 40986 || || | || || ||||| || || ||| ||||||| |||||| || || | Sbjct 8767 GCCAGCGTGGCATGCGTAGGTATCACCGCATCCTTGCAGGGTAAGCGTGCTGATCTGCTG 8826 Query 40987 ATTCTAGCCGATGATATTGAGACTCAACG--TAACTCTATGACTCAGACTGAGCGTGAGA 41044 |||| | |||||||| |||||| ||| ||| | |||| || | ||||| Sbjct 8827 ATTC---CAGATGATATCGAGACT--ACGAACAACGGTCTGACGGCTACAAACCGTGAAG 8881 Query 41045 AGCTATTGCTACTTACTAAAGAGTTCGCTGCTATCTGTATCTCA-GGTGAGATTATGTAT 41103 ||| || | | | || || ||| | || || || | || || ||| | |||| Sbjct 8882 TGCTGCTGTTGCGCTCCAAGGACTTCTCCGCGATTAATA-CGCACGGGAAGACTCTGTAC 8940 Query 41104 TTAGGTACACCGCAGACTAAAGACTCTGTGTATCGCTCTCTCCCTGCTCGTGGTTACGAC 41163 | || ||||||||||| |||||| | | || | || | || ||||| | || Sbjct 8941 CTGGGGACACCGCAGACCAAAGACAGTATCTACAAGACCCTGGCGGCGCGTGGCTTTGAG 9000 Query 41164 GTTCGTGTTTGGTGTGGTCGTTACCCTACCGATGAAGAACTCGAACGCTA 41213 |||| || ||| |||||| ||||||| |||||| ||||| || Sbjct 9001 ATTCGCGTATGGCCTGGTCGCGTACCTACCGTAGAAGAAGAGGAACGTTA 9050 Score = 80.6 bits (88), Expect = 7e-11 Identities = 91/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 17548 GTAGCCGATCATGATCATAAGACAGGTGAGATTCGTGGTGTACTTCATCGTTCCTGTAAT 17607 || ||||| || || |||| |||||| ||| ||||||| ||| || || ||||| ||| Sbjct 30811 GTCGCCGACCACGACCATATTACAGGTCTGATACGTGGTGCACTGCACCGCTCCTGCAAT 30870 Query 17608 GCTGCTGAGGGTAAGGTAGCCAATGCAGCAGGGGCGTGGGGTGCTAAGTCTATGGCGTAT 17667 || || ||||||||||| || || || || || |||||||| ||| |||| ||| Sbjct 30871 GCAGCAGAGGGTAAGGTGGCTAACGCCGCCGGCCGCTGGGGTGCGAAGAGTATGCAGTAC 30930 Query 17668 GA 17669 || Sbjct 30931 GA 30932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136125351193888