Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2770 132 5e-26 >seq2770 Length=41231 Score = 132 bits (146), Expect = 5e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||||||||| || | | || |||||||||||||| ||||| | |||||| ||| Sbjct 19815 CAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAAAGCGTACGCCCATC 19756 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| ||||||||||| | | | || ||||| || ||||| |||||||||||||||||||| Sbjct 19755 TTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGTATGCCTTCTTTATC 19696 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||||||| ||| | | ||| | || || | | ||| || || | || | || Sbjct 19695 TTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAACCTCTAATGTTATTGT 19636 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||||| || || |||| || |||||||| Sbjct 19635 TTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 |||||| ||||||| |||| |||||||| ||||| ||||| | || | ||| Sbjct 20727 CAAAACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGATAAAGTCCTGCCATC 20668 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| | || ||||| | | |||| ||||| || ||||||||||| || ||||||||||| Sbjct 20667 TTCTAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATCCCTTCTTTATC 20608 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 |||||| ||| | | ||| | ||||| | || || ||||| | || | || Sbjct 20607 TTGAATTTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCTACTTCAAGAGTTATTGT 20548 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||||| | |||||| | ||| || ||||| Sbjct 20547 TTTACCAGTTAAAGTTTTAACGAATATTTGCAT 20515 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTC-GCTCATGGTACGCGA 131967 ||||| || | ||| | | || ||||| |||||||||||||| | | ||| |||| Sbjct 20045 CGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGATAATG-TACGACC 19987 Query 131968 ATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTT 132027 |||||| ||||| ||||| | | | |||| | |||||||||||| || || |||||||| Sbjct 19986 ATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGGAATTCCTTCTTT 19927 Query 132028 ATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAG 132087 || |||||| ||| | | ||| | ||||| | ||||| ||||| | || | Sbjct 19926 GTCTTGAATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTACTTCTAAGGTAAT 19867 Query 132088 CGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||| | || || | ||||||||||| Sbjct 19866 AGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCAT 19831 Score = 105 bits (116), Expect = 6e-18 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGA--ATCTTCGAGCTGTTTACCGG 131987 || |||||||||||||| || || | || || |||| |||||| ||||| ||||| | Sbjct 20480 GATTCTTTTTGAATGTTATAATC--TGATAGTGTGCGACCATCTTCTAGCTGCTTACCAG 20423 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | | || || | ||||||||| ||||| || ||||||||||| ||| || ||| | Sbjct 20422 CAAAAATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTTATCTTGAATCTTAGCTTTGA 20363 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | ||| | || || | || ||||| || | || | || |||||||| ||||||| Sbjct 20362 CATTTTCAATTGTGTCACTTGGTTCCACCTCAAGTGTAATGGTCTTACCAGTAAGAGTTT 20303 Query 132108 TTATGAAAATCTGCAT 132123 | | ||||||||||| Sbjct 20302 TGACAAAAATCTGCAT 20287 Score = 105 bits (116), Expect = 6e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTC-GCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGA 131988 || || |||||||| || ||||| | | ||| | || | ||||| |||||||| || | Sbjct 20936 GATTCCTTTTGAATATTATAGTCTGATAATGTTCTGCCA-TCTTCAAGCTGTTTTCCTGC 20878 Query 131989 ATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAA 132048 | | || || ||||| ||||| ||||| |||||||||||||| |||||| || | Sbjct 20877 AAAAATAAGTCGCTGCTGATCAGGAGGAATGCCTTCTTTATCTTGAATTTTAGCCTTTAC 20818 Query 132049 CTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 132108 | ||| | |||||| | ||||| || || | || | ||||||||||||| || || Sbjct 20817 ATTTTCAATAGTATCACTGGGCTCAACCTCTAGAGTTATTGTTTTACCAGTCAAGGTCTT 20758 Query 132109 TATGAAAATCTGCAT 132123 || ||| || ||||| Sbjct 20757 TACGAATATTTGCAT 20743 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 |||| |||||||| || |||||||| | ||| || |||||| |||||||| || | Sbjct 21166 TTGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCGACCATCTTCTAGCTGTTTTCCTG 21107 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | | || || | ||||||||| || || || ||||||||||| ||| || || | Sbjct 21106 CAAATATGAGCCTCTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATCTTAGCCTTTA 21047 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | ||| | |||||| | ||||| ||||| | || | ||||| ||||| ||||| | Sbjct 21046 CATTTTCAATAGTATCACTAGGCTCAACTTCTAATGTTATGGTTTTCCCAGTAAGAGTCT 20987 Query 132108 TTATGAAAATCTGCATG 132124 | | ||||| |||||| Sbjct 20986 TAACAAAAATTTGCATG 20970 Score = 100 bits (110), Expect = 3e-16 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGA--ATCTTCGAGCTGTTTACCGG 131987 || ||||||||||| || ||||| | || | |||| |||||| || |||||||| | Sbjct 19568 GATTCTTTTTGAATATTATAGTC--TGATAGAGTGCGACCATCTTCAAGTTGTTTACCTG 19511 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | |||||| | ||| ||||| ||||| || ||||| ||||| ||||||| ||| | Sbjct 19510 CAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTATCTTGAATTTTTGCTTTAA 19451 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | ||| | || || | || || ||||| | ||| | ||||||||||| | |||| Sbjct 19450 CATTTTCTATCGTGTCACTGGGTTCTACTTCTAACGTAATGGTTTTACCAGTTAATGTTT 19391 Query 132108 TTATGAAAATCTGCAT 132123 | | ||| || ||||| Sbjct 19390 TAACGAAGATTTGCAT 19375 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || ||||||||||||||||| || ||||| |||||| || || ||||| | | Sbjct 20252 GATTCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCTAGTTGCTTACCAGCA 20193 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || | | ||||||||| || || || ||||||||||| |||||| || | Sbjct 20192 AATATCAATCTCTGTTGATCAGGTGGGATTCCTTCTTTATCTTGAATTTTAGCCTTTACG 20133 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || ||| | || || ||||| | || | || |||||||| ||||| ||| Sbjct 20132 TTTTCAATGGTGTCGCTAGGTTCAACTTCTAATGTTATTGTCTTACCAGTAAGAGTCTTT 20073 Query 132110 ATGAAAATCTGCAT 132123 | || || ||||| Sbjct 20072 ACAAAGATTTGCAT 20059 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||||||||||||| | | || || ||||| ||||| || || || ||| | | Sbjct 22627 CGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCTGACAAGGTTCTGCCA 22568 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| ||||| | | |||| |||||||||||||| || || ||||| |||||| Sbjct 22567 TCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGGGGAATGCCCTCTTTA 22508 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||| ||| | | || | ||||| | || || ||||| | || | Sbjct 22507 TCCTGGATCTTTGCTTTTACATTCTCAATGGTATCACTGGGTTCAACTTCTAGAGTAATA 22448 Query 132089 GTTTTACC 132096 |||||||| Sbjct 22447 GTTTTACC 22440 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||| | | |||| ||||| ||||| ||||| || | ||||| ||| || Sbjct 19356 AACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAAAGAGTACGTCCATCCTC 19297 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 || || ||||| | | | |||| ||| |||||||| || || || ||||| || || Sbjct 19296 AAGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTG 19237 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| ||| | | || | || || | | || ||||| | || | ||||| Sbjct 19236 AATTTTAGCTTTAACGTTCTCGATGGTGTCACTTTGTTCAACTTCTAGAGTTATTGTTTT 19177 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 ||||| | ||||| | ||||||||||||| Sbjct 19176 GCCAGTTAAGGTTTTAACGAAAATCTGCATG 19146 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| |||| | || ||||| || ||||| ||||| || ||||| |||||| Sbjct 19128 AACCAAGTGTAGTGTCGATTCTTTCTGGATGTTATAGTCTGACAATGTACGTCCATCTTC 19069 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||| || || || | | | || || | ||| || || ||||| || ||||||||||| Sbjct 19068 GAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCTTTATCCTG 19009 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| || | | ||| | || || | ||||| || || | || | || || Sbjct 19008 AATTTTAACCTTAACATTTTCTATGGTGTCACTAGGCTCAACCTCTAATGTGATGGTCTT 18949 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || ||||| | || |||||||| Sbjct 18948 GCCAGTAAGTGTTTTCACAAAGATCTGCAT 18919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475706746841040