Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq110060 104 7e-19 seq106930 98.7 3e-17 seq87018 98.7 3e-17 seq24654 98.7 3e-17 seq23639 98.7 3e-17 seq23486 98.7 3e-17 seq780 98.7 3e-17 seq48320 80.6 8e-12 >seq110060 Length=2164 Score = 104 bits (114), Expect = 7e-19 Identities = 76/87 (87%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 2755 GTACTGTGTTTATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAG 2813 || ||| || |||| || ||| |||||||||||||||||| ||||||||||||||||||| Sbjct 1729 GTGCTGCGTGTATGTGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAG 1788 Query 2814 GTCCCTGGTTCAACCCCGGGCTTCAGC 2840 ||||||||||| | |||||| ||| || Sbjct 1789 GTCCCTGGTTCGATCCCGGGTTTCGGC 1815 >seq106930 Length=3113 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 173 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 114 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 113 CCGGGTTTCGGC 102 >seq87018 Length=3116 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 592 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 651 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 652 CCGGGTTTCGGC 663 >seq24654 Length=27924 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 12143 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 12202 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 12203 CCGGGTTTCGGC 12214 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||| ||| | | Sbjct 21291 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGATTCGATC 21350 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 21351 CCGGGTTTCGGC 21362 >seq23639 Length=9982 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 5728 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5787 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 5788 CCGGGTTTCGGC 5799 >seq23486 Length=9226 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 3 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 62 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 63 CCGGGTTTCGGC 74 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| ||||||||||||||||||| |||||||||||||||||| |||||||||| | | Sbjct 1826 GCCGAAATAGCTCAGTTGGGAGAGCAGTAGACTGAAGATCTAAAGATCCCTGGTTCGATC 1885 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1886 CCGGGTTTCGGC 1897 Score = 82.4 bits (90), Expect = 2e-12 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 || |||||||||| || |||| |||||||||||||||||| ||||||||||| | ||||| Sbjct 1561 AAATAGCTCAGTTTGGGGAGCGTTAGACTGAAGATCTAAAAGTCCCTGGTTCGATCCCGG 1620 Query 2833 GCTTCAGC 2840 | ||| || Sbjct 1621 GTTTCGGC 1628 Score = 80.6 bits (88), Expect = 8e-12 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| ||| |||||||||||||| ||||||||||||||||| | ||| |||||| | | Sbjct 1285 GCCGAAATAGTTCAGTTGGGAGAGCGTTAGACTGAAGATCTAATGCTCCATGGTTCGATC 1344 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1345 CCGGGTTTCGGC 1356 >seq780 Length=63505 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 31961 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 31902 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 31901 CCGGGTTTCGGC 31890 >seq48320 Length=13204 Score = 80.6 bits (88), Expect = 8e-12 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||| |||| |||||| ||| ||||||||| | Sbjct 16 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGATTGAATATCTAATGGTTACTGGTTCAATC 75 Query 2829 CCGGGCTTCAGC 2840 ||| | |||||| Sbjct 76 CCGAGTTTCAGC 87 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15823282284030