Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2770 105 6e-18 >seq2770 Length=41231 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 ||||||||||| | | ||| |||||||| | ||| |||||||| ||||| ||||| Sbjct 22642 TTTCCACCACGAAGTCGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCT 22583 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | |||||||| | || |||||||||||||| ||||| || | ||||| || || | Sbjct 22582 GACAAGGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGG 22523 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 |||| || ||| || ||| ||||||| || | | | | | || || || | ||| Sbjct 22522 GGAATGCCCTCTTTATCCTGGATCTTTGCTTTTACATTCTCAATGGTATCACTGGGTTCA 22463 Query 35687 ACCTCCACCGTGATCGTTTTACC 35709 || || | || || |||||||| Sbjct 22462 ACTTCTAGAGTAATAGTTTTACC 22440 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| || | ||||||||| ||||| || | ||| || ||||||||||| || || | Sbjct 19831 TTCCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTG 19772 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || ||| | || || ||||| ||||| ||||| || | || ||||| || | || Sbjct 19771 AAAGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAG 19712 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 | | || || ||| | ||| |||||| || | | || | | ||||| || || || Sbjct 19711 GTATGC-CTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCA 19653 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | || || |||||||| || | || || ||||| |||||||| Sbjct 19652 ACCTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||| || | ||| || ||| || || ||||||||||| || | || || || | || Sbjct 20043 CAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGATAATGTACGACCATC 19984 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || ||||||||||| ||||| || |||| ||| || || | |||| | || |||| Sbjct 19983 TTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGGAATTCCTTCTTTGT- 19925 Query 35644 CATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCG 35702 | ||| ||| || || | | || | | || || || | || || || | || || | Sbjct 19924 CTTGAATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTACTTCTAAGGTAATAG 19865 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||| || || || || |||||||| |||||||||| Sbjct 19864 TTTTCCCAGTTAATGTCTTCACAAAAATCTGCATTC 19829 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||||||||| ||||| | | || || | || || ||||||||||| ||||| Sbjct 20477 TCTTTTTGAATGTTATAATCTGATAGTGTGCGACCATCTTCTAGCTGCTTACCAGCAAAA 20418 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | | ||| || || | ||||| | || || || ||||| || | | || Sbjct 20417 ATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTTATCTTGAATCTTAGCTTTGACATTT 20358 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | ||||||||| | || || || ||||| || | |||||| ||| Sbjct 20357 TCAATTGTGTCACTTGGTTCCACCTCAAGTGTAATGGTCTTACCAGTAAGAGTTTTGACA 20298 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 20297 AAAATCTGCAT 20287 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | | ||| | ||||| |||| || || || || ||||| || || | | Sbjct 19145 CCACCTCTCAGCCTAAGAACCAAGTGTAGTGTCGATTCTTTCTGGATGTTATAGTCTGAC 19086 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || || ||||| || ||||| |||| || ||||||||| | ||| Sbjct 19085 AATGTACGTCCATCTTCGAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGG 19026 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || || ||| || || ||| | | || | | ||||| || | || ||| Sbjct 19025 ATTCCTTCTTTATCCTGAATTTTAACCTTAACATTTTCTATGGTGTCACTAGGCTCAACC 18966 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || | ||||| || || || || | ||||||||||| ||||||||| Sbjct 18965 TCTAATGTGATGGTCTTGCCAGTAAGTGTTTTCACAAAGATCTGCATT 18918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449938140255120