Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_026602.1 Length=43639 Score E Sequences producing significant alignments: (Bits) Value seq3139 143 7e-30 >seq3139 Length=44538 Score = 143 bits (158), Expect = 7e-30 Identities = 374/571 (65%), Gaps = 21/571 (4%) Strand=Plus/Plus Query 39935 GGTGACCGTACCTCGGCCACCAGCTTCGACGTGAACTGGGCGTTGAAGGGAGTCGAGAAA 39994 ||||||||||| ||| | | | || ||||| |||| | ||||| | || ||| Sbjct 8704 GGTGACCGTACATCGTACGCGAACTATGACGTACACTGCGACCTGAAGCCCCTGGATAAA 8763 Query 39995 TCGGCTTCCATCAACTGCATCGGGATCACCGCTGCCCTCCAGGGTTACCGGGCTGACATC 40054 || || | | ||| | || |||||||| || | |||||| | || ||||| | Sbjct 8764 TCCGCCAGCGTGGCATGCGTAGGTATCACCGCATCCTTGCAGGGTAAGCGTGCTGATCTG 8823 Query 40055 CTGATTCCTGACGACATCGAGACCACGAAGAACGGCCTCACCGCCACCGAGCGGGCCAAG 40114 |||||||| || || |||||||| ||||| ||||| || || || || | || | | Sbjct 8824 CTGATTCCAGATGATATCGAGACTACGAACAACGGTCTGACGGCTACAAACCGTGAAGTG 8883 Query 40115 CTGACGCGGCAGTCGCAGGAGTTCACCTCTATCTGTACCCACGGTAAGATTCTCTACCTG 40174 ||| | || || |||| ||| || | || ||| ||||| |||| ||| |||||| Sbjct 8884 CTGCTGTTGCGCTCCAAGGACTTCTCCGCGATTAATACGCACGGGAAGACTCTGTACCTG 8943 Query 40175 GGCACGCCGCAGTCCCGTGAGTCGATCTACAACGGCCTGCCGGCGCGGGGCTTCCTGATG 40234 || || |||||| || || |||||||| |||| ||||||| ||||| ||| Sbjct 8944 GGGACACCGCAGACCAAAGACAGTATCTACAAGACCCTGGCGGCGCGTGGCTTTGAGATT 9003 Query 40235 CGTATCTGGCCGGGCCGCTTCCCGACCCTAGATGAGCAGGAACGCTACGGCGACTGGCTC 40294 || | ||||| || ||| | || ||| |||| || ||||||| |||| || Sbjct 9004 CGCGTATGGCCTGGTCGCGTACCTACCGTAGAAGAAGAGGAACGTTACGCCG-------- 9055 Query 40295 GCACCTTCCATCCTAGCGCGCATTGCCCGCCTGGAGGAGAAAGGCCACAAC---CCGCGT 40351 | || || || || ||| | |||| || | || | ||||| Sbjct 9056 GAACATTGGCTC----CGATGATT------CAGGAGATGATTCGGAACGGCGCGGCGCGT 9105 Query 40352 ACTGGCAAGGGCCTGGATGGGACCCGTGGCTGGGCTGCTGATCCGCAGCGCTACAACGAA 40411 || || |||||||| || | ||| ||| || | || || ||| |||| ||| Sbjct 9106 ACAGGTTTCGGCCTGGACGGCAACCGCGGCGAGGTAACCGACCCCATGCGTTACACGGAA 9165 Query 40412 GAGGACCTGCTCGACAAGGAGCTTGACCAAGGCCCCGAGGGCTTCCAGCTTCAGTACATG 40471 || || | ||| |||||| |||||| ||||| ||||| |||||| | ||||||||| Sbjct 9166 GATGATTTAATCGGCAAGGAACTTGACTTCGGCCCTGAGGGGTTCCAGTTGCAGTACATG 9225 Query 40472 CTGGACACCAGCCTCGCCGACGAGCAGCGTA 40502 ||||| || || || || | ||||||| Sbjct 9226 CTGGATACGTCACTAGCTGATGCACAGCGTA 9256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139271668795868