Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_027342.1 Length=41268 Score E Sequences producing significant alignments: (Bits) Value seq3139 123 7e-24 >seq3139 Length=44538 Score = 123 bits (136), Expect = 7e-24 Identities = 236/345 (68%), Gaps = 2/345 (1%) Strand=Plus/Plus Query 9686 AGTAATCCAAATCTCCAGAATTTACCTAAAGATGGTAATAGTAAAGTCAAGCAGATGTTC 9745 || || || || |||||||| | || |||||| | || || |||||||||||| Sbjct 26929 AGCAACCCGAACCTCCAGAACCTCCCACGAGATGGGACGTCCAAGGTTAAGCAGATGTTC 26988 Query 9746 ACTAGTCGTTACGGTGAACAAGGGTACATCATTGAGGTTGACTACTCAGCACTTGAAGTT 9805 || || || | |||||| | || |||||||||||| || ||||| ||||| |||||| Sbjct 26989 ACCAGCCGATTCGGTGAGAACGGTCGCATCATTGAGGTGGATTACTCCGCACTGGAAGTT 27048 Query 9806 GTAATGAGTTGTGTTCACACAGGTGACACAGAGTTACTGCAATTACTCCTTGATGGTACG 9865 |||||| |||| ||| | || | || || ||| | | | | || || Sbjct 27049 GTAATGCTCTGTGCGATGACACGGGATATGGACTTGCTGGCGCTGTTACAGGCTGACACT 27108 Query 9866 GATATGCACTGTTATCGCTTAGCGTTTAAACTAGGTGAGGATTATGAGAGTGTGTACGAG 9925 || |||||||| ||||| | |||| || || || || ||| |||||||||| Sbjct 27109 GACATGCACTGCTATCGACTGGCGTACCGCCTGGGCGAATCGTACGAGGATGTGTACGAG 27168 Query 9926 AAGTGTCACAACGAGGAACACCCAGAGCATAAGCATTATAAGTCACTGAGAAGTAAGATA 9985 ||||| |||||||| |||||||| ||||| ||| | || ||| || ||| | || Sbjct 27169 AAGTGCCACAACGAAGAACACCCGGAGCACAAGAAGTACAAGCAGATGCGAACGGATAT- 27227 Query 9986 AAATCCCCTAGC-TTCGCTGCACAGTACGGAGCTAGTGCAGCAGG 10029 || || || | || |||| |||||||| |||| ||||| || Sbjct 27228 TAAGCCGCTGTCATTTGCTGACCAGTACGGTGCTACGGCAGCCGG 27272 Score = 105 bits (116), Expect = 2e-18 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 35380 GATTTCAGAGACTTTGCGTACGTGGGTATGCAGTTACTAGGTTTTAAACTCACACCAATG 35439 || |||| ||||||||| | |||| |||| || || || || ||||||| |||||| Sbjct 8401 GAATTCACCGACTTTGCGGAGCTGGGGATGCGCTTCCTCGGCTTCGAACTCACGCCAATG 8460 Query 35440 CAAGCTGATATAGCTTGGTACATGCAGCACTGTCCTAATAAGGCTATGGTGTCTGCTCAA 35499 ||| ||||| ||||||||||||||||| | || | || |||||| | || || Sbjct 8461 CAAAGGGATATTGCTTGGTACATGCAGCATGGCCCAAGGAACAGCATGGTGGCGGCACAG 8520 Query 35500 CGTGGTGAAGCTAAGAGTACACTAGCTGCATTGTTCGCTGTGTGGA 35545 ||||| || || ||| || || ||||| ||||||||||||||| Sbjct 8521 CGTGGGGAGGCCAAGTCCACCCTGGCTGCGCTGTTCGCTGTGTGGA 8566 Score = 80.6 bits (88), Expect = 7e-11 Identities = 89/119 (75%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 15518 GGGCATGGTACTAAGTTCTTCTGGTGGCAGATGCTAGCTGGAGATACCGCTGATAATGTA 15577 ||||| ||||| |||||||||||| ||||||||| || || || || ||||| || Sbjct 29782 GGGCACGGTACCAAGTTCTTCTGGGCGCAGATGCTGATGGGTGACACTGCAGATAACGTG 29841 Query 15578 AAAGGTATCTTGAAGTTACATGGCAAGAACTGCGGGGATATAGGAGCATATGAGGCACT 15636 ||||||||| | ||| | ||||| ||| ||| || | | | ||||| || |||||| Sbjct 29842 AAAGGTATCGTTAAGCTGCATGGGAAGGCCTGTGGCGCTGTTGGAGCGTACCTGGCACT 29900 Score = 80.6 bits (88), Expect = 7e-11 Identities = 110/154 (71%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 16115 TAAACCTATTGACCTAAGTATCAAGGGTGAGATGGTACTTGACCATTCACACGATACGGG 16174 ||| |||||||| | ||||||||||| ||| || ||||| || ||| || Sbjct 30777 TAAGCCTATTGATTTCAGTATCAAGGGCGAGGCAGTCGCCGACCACGACCATATTACAGG 30836 Query 16175 ATTAATACGGGGTGTACTGCATCGCTCTTGTAATAGCTCTGAAGGTAAGGTGGCTAATGC 16234 | ||||| |||| |||||| ||||| || ||| | || |||||||||||||| || Sbjct 30837 TCTGATACGTGGTGCACTGCACCGCTCCTGCAATGCAGCAGAGGGTAAGGTGGCTAACGC 30896 Query 16235 AGCAGGTAGGTGGGGCGCTAAGAGTATGGATTAC 16268 || || | ||||| || ||||||||| | ||| Sbjct 30897 CGCCGGCCGCTGGGGTGCGAAGAGTATGCAGTAC 30930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131698146933640