Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2770 118 9e-22 >seq2770 Length=41231 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | |||| ||| ||||| || | ||||| ||||||||||| || ||||| Sbjct 19829 CCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAA 19770 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | ||| | ||||| ||||||||||| || |||||||||| || ||||| || || Sbjct 19769 AGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGT 19710 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || |||||||| || || ||| | |||| | ||||| ||| ||||| Sbjct 19709 ATGCCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAACC 19650 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| ||||| | ||| || || || || || |||||||| |||||| Sbjct 19649 TCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCATA 19602 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||||| ||||||||||| || || || | | || |||| | ||||| ||||| ||||| Sbjct 20483 GTAGATTCTTTTTGAATGTTATAATCTGATAGTG-TGCGACCATCTTCTAGCTGCTTACC 20425 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 || ||||||| | ||||||||| || || | ||| |||||||| ||||| ||| Sbjct 20424 AGCAAAAATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTTATCTTGAATCTTAGCTTT 20365 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | |||| | ||||| | | ||| || || || || || | || || || ||||| Sbjct 20364 GACATTTTCAATTGTGTCACTTGGTTCCACCTCAAGTGTAATGGTCTTACCAGTAAGAGT 20305 Query 27230 TTTCACAAAGATTTGCATA 27248 ||| ||||| || |||||| Sbjct 20304 TTTGACAAAAATCTGCATA 20286 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || || ||||||||||| ||||| | | ||||| || | ||||| |||||||| || Sbjct 20939 GTGGATTCCTTTTGAATATTATAGTCTGATAATGTTCTGC-CATCTTCAAGCTGTTTTCC 20881 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 || |||| || ||||| ||||| || || | || |||||||| || || || Sbjct 20880 TGCAAAAATAAGTCGCTGCTGATCAGGAGGAATGCCTTCTTTATCTTGAATTTTAGCCTT 20821 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | |||| | ||| || ||| ||||| ||||||||||| | ||| || |||| || Sbjct 20820 TACATTTTCAATAGTATCACTGGGCTCAACCTCTAGAGTTATTGTTTTACCAGTCAAGGT 20761 Query 27230 TTTCACAAAGATTTGCATA 27248 || || || ||||||||| Sbjct 20760 CTTTACGAATATTTGCATA 20742 Score = 100 bits (110), Expect = 2e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| |||||||| | ||||| || ||||| || || || || || | | | | Sbjct 22627 CGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCTGACAAGGTTCTGCCA 22568 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| ||||| ||||| || | || |||||||||||||| || || | ||||||||| Sbjct 22567 TCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGGGGAATGCCCTCTTTA 22508 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| ||| | | || | || || ||| ||||||||||||||| ||| Sbjct 22507 TCCTGGATCTTTGCTTTTACATTCTCAATGGTATCACTGGGTTCAACTTCTAGAGTAATA 22448 Query 27213 GATTTGCC 27220 | ||| || Sbjct 22447 GTTTTACC 22440 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || |||||||| ||||||||||| | | | || | ||||| |||||||| || Sbjct 21167 GTTGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCGACCATCTTCTAGCTGTTTTCCT 21108 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||| | ||||||||| || || | || |||||||| ||||| || Sbjct 21107 GCAAATATGAGCCTCTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATCTTAGCCTTT 21048 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | |||| | ||| || | | |||||||||| ||||| | ||| || || ||||| Sbjct 21047 ACATTTTCAATAGTATCACTAGGCTCAACTTCTAATGTTATGGTTTTCCCAGTAAGAGTC 20988 Query 27231 TTCACAAAGATTTGCAT 27247 || ||||| |||||||| Sbjct 20987 TTAACAAAAATTTGCAT 20971 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || |||||||| |||||||| || | || | ||||| || || ||||| Sbjct 20255 GTAGATTCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCTAGTTGCTTACCA 20196 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || | | ||||||||| || || | || |||||||| || || || Sbjct 20195 GCAAATATCAATCTCTGTTGATCAGGTGGGATTCCTTCTTTATCTTGAATTTTAGCCTTT 20136 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | |||| | ||||| | | ||||||||||| ||||| | || || || ||||| Sbjct 20135 ACGTTTTCAATGGTGTCGCTAGGTTCAACTTCTAATGTTATTGTCTTACCAGTAAGAGTC 20076 Query 27231 TTCACAAAGATTTGCATAGCTGCT 27254 || ||||||||||||||| || || Sbjct 20075 TTTACAAAGATTTGCATACCTCCT 20052 Score = 91.5 bits (100), Expect = 1e-13 Identities = 163/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| |||| || || ||||| || || || ||||| || | || | |||||| Sbjct 19127 ACCAAGTGTAGTGTCGATTCTTTCTGGATGTTATAGTCTGACAATGTACGTCCATCTTCG 19068 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || || || || || |||| || | ||| || || || || | || |||||||| Sbjct 19067 AGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCTTTATCCTGA 19008 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || || | |||||| ||||| | | ||||| |||| || || | ||| Sbjct 19007 ATTTTAACCTTAACATTTTCTATGGTGTCACTAGGCTCAACCTCTAATGTGATGGTCTTG 18948 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTAAAAATTTATTAAACCTTATTA 27276 || || || |||||||||||||| ||||| | | |||||||| | | |||| ||||| Sbjct 18947 CCAGTAAGTGTTTTCACAAAGATCTGCATTGTTTCTAAAAATAGAGTTAACCATATTA 18890 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27030 AACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGC 27089 |||| | ||| | ||| | ||||| |||||||||||||| ||||| | |||| Sbjct 19592 AACCTAAGTACAAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGATAGAGTGCGA 19533 Query 27090 TCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCT 27149 | ||||| || |||||||| || | || | | ||| ||||| || || | || || Sbjct 19532 CCATCTTCAAGTTGTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCC 19473 Query 27150 TTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTT 27209 ||||| || || ||| | |||||| ||||| ||| ||| ||||||| || Sbjct 19472 TTATCTTGAATTTTTGCTTTAACATTTTCTATCGTGTCACTGGGTTCTACTTCTAACGTA 19413 Query 27210 ATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | ||| || || | ||||| || ||||||||||| Sbjct 19412 ATGGTTTTACCAGTTAATGTTTTAACGAAGATTTGCAT 19375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424148172297168