Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2770 174 2e-38 >seq2770 Length=41231 Score = 174 bits (192), Expect = 2e-38 Identities = 161/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| || || ||||| |||||||| || || | ||||||||| | | Sbjct 18918 AATGCAGATCTTTGTGAAAACACTTACTGGCAAGACCATCACATTAGAGGTTGAGCCTAG 18977 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | |||| | |||| |||||||||||| || || ||||| ||||| ||||| Sbjct 18978 TGACACCATAGAAAATGTTAAGGTTAAAATTCAGGATAAAGAAGGAATCCCTCCTGACCA 19037 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || ||||||||||| ||||||||||| |||| ||||| | |||||||||| Sbjct 19038 GCAGAGGCTGATTTTTGCTGGCAAGCAACTCGAAGATGGACGTACATTGTCAGACTATAA 19097 Query 27585 TGTCCAAAAGGAATCCACTCTTCA 27608 |||| || ||||| || || || Sbjct 19098 CATCCAGAAAGAATCGACACTACA 19121 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| | || || || || || ||||| ||||||||| | || Sbjct 20743 ATGCAAATATTCGTAAAGACCTTGACTGGTAAAACAATAACTCTAGAGGTTGAGCCCAGT 20802 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| | |||||||||||||| || || || || |||||||| || ||| Sbjct 20803 GATACTATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGCATTCCTCCTGATCAG 20862 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || |||||||| || || || || || |||| | || || ||||||||||| Sbjct 20863 CAGCGACTTATTTTTGCAGGAAAACAGCTTGAAGATGGCAGAACATTATCAGACTATAAT 20922 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||||||||| ||||| || | | ||| | ||||| Sbjct 20923 ATTCAAAAGGAATCCACTCTGCATCTTGTGCTCAGACTTAGAGGTGG 20969 Score = 170 bits (188), Expect = 2e-37 Identities = 150/187 (80%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 27428 TTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGG 27487 |||| || |||||||||||| | || |||||| | |||||| || | |||| |||||| Sbjct 21334 TTACAGGAAAGACTATTACTTTAGAAGTTGAGCCTAGTGATACTATAGAAAATGTGAAGG 21393 Query 27488 CTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTA 27547 | |||||||| ||||| ||||| ||||| ||||| |||||| | || ||||||||||||| Sbjct 21394 CAAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAGCAGAGGCTTATTTTTGCTGGTA 21453 Query 27548 AGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTC 27607 | ||||| ||||||| | | || || |||| || ||| | ||||| ||||| ||||||| Sbjct 21454 AACAACTAGAGGATGGTAGAACATTATCAGATTACAATATACAAAAAGAATCTACTCTTC 21513 Query 27608 ATCTAGT 27614 |||| || Sbjct 21514 ATCTGGT 21520 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| ||||| || ||||| || || | || ||||| | | Sbjct 20059 ATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACAATAACATTAGAAGTTGAACCTAGC 20118 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | |||||||||||||| || || || ||||| || || || || Sbjct 20119 GACACCATTGAAAACGTAAAGGCTAAAATTCAAGATAAAGAAGGAATCCCACCTGATCAA 20178 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||||||||||||||| || |||| ||||| || | ||||| || Sbjct 20179 CAGAGATTGATATTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTGTCTGACTACAAC 20238 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||| |||||||| ||||| | || ||||| ||||| Sbjct 20239 ATTCAAAAGGAATCTACTCTTCACCTAGTTCTCCGGCTTCGTGGTGG 20285 Score = 167 bits (184), Expect = 3e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||| || ||||| || ||||| ||||| |||||||| || || || Sbjct 20287 ATGCAGATTTTTGTCAAAACTCTTACTGGTAAGACCATTACACTTGAGGTGGAACCAAGT 20346 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || ||||| ||||| || || || || |||||||| || || Sbjct 20347 GACACAATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 20406 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || ||||||||||||||||| || || |||| ||| || ||| |||| ||||| Sbjct 20407 CAGAGACTCATTTTTGCTGGTAAGCAGCTAGAAGATGGTCGCACACTATCAGATTATAAC 20466 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 | ||||| ||||| || ||||| || || || Sbjct 20467 ATTCAAAAAGAATCTACACTTCACCTTGTATT 20498 Score = 165 bits (182), Expect = 9e-36 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| ||||| | || || || |||||||| | || || ||| | | Sbjct 19830 AATGCAGATTTTTGTGAAGACATTAACTGGGAAAACTATTACCTTAGAAGTAGAGCCTAG 19889 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| |||| | || ||||||||||| ||||| || |||||||| ||||| || Sbjct 19890 TGATACAATTGAAAATGTTAAAGCTAAAATTCAAGACAAAGAAGGAATTCCACCAGATCA 19949 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | ||||||||||||||||||| || || |||| |||||| || | ||||| || Sbjct 19950 ACAGAGGTTAATTTTTGCTGGTAAGCAGCTTGAAGATGGTCGTACATTATCTGACTACAA 20009 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | || || ||||| ||| | ||||| |||||||| || Sbjct 20010 CATTCAGAAAGAATCTACTTTGCATCTCGTCTTGCGACT 20048 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | || || || || || |||||||| || || || || Sbjct 20515 ATGCAAATATTCGTTAAAACTTTAACTGGTAAAACAATAACTCTTGAAGTAGAACCAAGT 20574 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| | || || |||||||| || || || || ||||||||||| ||| Sbjct 20575 GATACGATAGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGGATTCCTCCAGATCAG 20634 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || ||||||||||||||| | || |||| | || || |||||||||| Sbjct 20635 CAACGTCTTATCTTTGCTGGTAAGCAATTAGAAGATGGCAGGACTTTATCAGACTATAAC 20694 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||| ||||| ||| | ||| |||| ||| | ||||| ||||| Sbjct 20695 ATCCAAAAAGAATCAACTTTACATTTAGTTTTGAGGCTTCGTGGTGG 20741 Score = 156 bits (172), Expect = 5e-33 Identities = 155/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 27433 GGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAA 27492 || || ||||||||||| || ||||| | |||||| ||||| ||| | || || || Sbjct 22440 GGTAAAACTATTACTCTAGAAGTTGAACCCAGTGATACCATTGAGAATGTAAAAGCAAAG 22499 Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 || ||||| || ||||| ||||| || || || |||||||| || |||||||||||||| Sbjct 22500 ATCCAGGATAAAGAGGGCATTCCCCCTGATCAACAGCGTCTTATCTTTGCTGGTAAGCAG 22559 Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTA 27612 || || |||| | ||| | |||| ||||| ||||||||||||| ||||| ||| | Sbjct 22560 CTGGAAGATGGCAGAACCTTGTCAGATTATAACATCCAAAAGGAATCTACTCTGCATTTG 22619 Query 27613 GTCTTGCGTCTTCGCGGTGGA 27633 || ||||| ||||| |||||| Sbjct 22620 GTTTTGCGACTTCGTGGTGGA 22640 Score = 154 bits (170), Expect = 2e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| ||||| || || || || || | ||||||||||| || Sbjct 19603 ATGCAGATCTTTGTAAAGACACTTACTGGTAAAACAATAACATTAGAGGTTGAGTCCAGT 19662 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || || |||||||| || || || || || ||||| || ||| Sbjct 19663 GACACAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGCATACCTCCTGATCAG 19722 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| |||||||||||||| || || || |||| ||||| || |||||||||| Sbjct 19723 CAACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGGCGTACGCTTTCAGACTATAAC 19782 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | ||||| ||||| || || || Sbjct 19783 ATTCAAAAAGAATCTACACTGCA 19805 Score = 149 bits (164), Expect = 7e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| || || || | || || || || ||||| | || || || | | Sbjct 19374 AATGCAAATCTTCGTTAAAACATTAACTGGTAAAACCATTACGTTAGAAGTAGAACCCAG 19433 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | || | |||| | || || |||||||| || ||||| ||||||||||| || || Sbjct 19434 TGACACGATAGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGAATTCCTCCCGATCA 19493 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | |||| ||||| ||||| ||||| || |||| ||| || ||| |||||||||| Sbjct 19494 GCAGAGGTTAATCTTTGCAGGTAAACAACTTGAAGATGGTCGCACTCTATCAGACTATAA 19553 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | | ||||| ||||| || |||||||| || Sbjct 19554 TATTCAAAAAGAATCTACCCTTCATCTTGT 19583 Score = 147 bits (162), Expect = 2e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || | || ||||| || || ||||| || ||||| | || Sbjct 19147 ATGCAGATTTTCGTTAAAACCTTAACTGGCAAAACAATAACTCTAGAAGTTGAACAAAGT 19206 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | || ||||||||||| |||||||| || ||||| || || || Sbjct 19207 GACACCATCGAGAACGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAA 19266 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| |||||||||||||||||||||| ||||||| ||||| || |||| || ||| Sbjct 19267 CAACGTTTAATTTTTGCTGGTAAGCAACTTGAGGATGGACGTACTCTTTCAGATTACAAT 19326 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | || || ||||| || |||||| |||| Sbjct 19327 ATTCAGAAAGAATCAACCCTTCATTTAGT 19355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569228136211680