Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2770 127 1e-24 >seq2770 Length=41231 Score = 127 bits (140), Expect = 1e-24 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || ||||| || | ||| | ||| || || |||||||| || || || Sbjct 20057 CCTCCTCTCAGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGAT 19998 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||| || | |||||||| || ||||| ||||| ||||| | |||||| || || || Sbjct 19997 AATGTACGACCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGGA 19938 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTC--TTCGCTCTCC 34656 | ||| || |||||| ||| ||| | |||||| | |||||| || | ||||| Sbjct 19937 ATTCCTTCTTTGTCT-TGAATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCT-- 19881 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | ||| || ||||| || ||||| || ||||||||||||||||| Sbjct 19880 ACTTCTAAGGTAATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCAT 19831 Score = 125 bits (138), Expect = 4e-24 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | | || ||||| || || || || ||||| || ||||||||| Sbjct 19373 CCACCTCTTAGCCTGAGAACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAA 19314 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || |||||||| ||||| ||||| |||||||| ||||| || || || Sbjct 19313 AGAGTACGTCCATCCTCAAGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGA 19254 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTCC 34656 | || ||||||||| ||| ||| | ||||||| | || |||| ||| | || Sbjct 19253 ATACCTTCCTTGTCT-TGAATTTTAGCTTTAACGTTCTCGATGGTGTCACTTTG--TTCA 19197 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| | ||||| ||||| || ||||| ||||| || |||||||||||| Sbjct 19196 ACTTCTAGAGTTATTGTTTTGCCAGTTAAGGTTTTAACGAAAATCTGCATG 19146 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||| ||||| || || || || |||||||||||||| |||||| Sbjct 19829 CCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAA 19770 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || ||| | ||||| || |||||||| ||||| || | ||| || || || || || Sbjct 19769 AGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGT 19710 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTG-TTTTAACGATAAAATTGTGTCTTCGCTCTCCAC 34658 | || || || ||| ||| ||||| ||||| | ||||||||| | ||| || Sbjct 19709 ATGCCTTCTTTATCT-TGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAAC 19651 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||||| |||||||| || | || || ||||| |||||||| Sbjct 19650 CTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 114 bits (126), Expect = 8e-21 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || |||||||| ||||| ||||| || || || | ||||||||||||||||| ||||| Sbjct 19565 TCTTTTTGAATATTATAGTCTGATAGAGTGCGACCATCTTCAAGTTGTTTACCTGCAAAG 19506 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GA 34634 ||||| | ||| || || || || | ||| ||||| ||| ||| ||||| |||||| Sbjct 19505 ATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTATCT-TGAATTTTTGCTTTAACATT 19447 Query 34635 TAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | || ||||| | || ||||| | || || |||||||| ||||| ||||| || Sbjct 19446 TTCTATCGTGTCACTGGGTTCTACTTCTAACGTAATGGTTTTACCAGTTAATGTTTTAAC 19387 Query 34695 AAAAATCTGCAT 34706 || || ||||| Sbjct 19386 GAAGATTTGCAT 19375 Score = 102 bits (112), Expect = 5e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| ||||| |||||||| ||||| |||||||| |||||||||||||| Sbjct 22639 CCACCACGAAGTCGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCTGAC 22580 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| || || ||||| ||||| || | ||||||||| || || || Sbjct 22579 AAGGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGGGGA 22520 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTA 34630 | ||||| || || ||||||| ||||| Sbjct 22519 ATGCCCTCTTTATCCTGGATCTTTGCTTTTA 22489 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 || |||||||||||||||||||| ||||| || | ||||| || || ||||| ||||| Sbjct 20477 TCTTTTTGAATGTTATAATCTGATAGTGTGCGACCATCTTCTAGCTGCTTACCAGCAAAA 20418 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || | | |||||| || || || | || || || ||| ||||| ||| | | Sbjct 20417 ATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTTATCTTGAATCTTAGCTTTGACATTT 20358 Query 34636 AAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 ||||||||| | | | ||||| || | || || || ||||| || | ||||| || Sbjct 20357 TCAATTGTGTCACTTGGT-TCCACCTCAAGTGTAATGGTCTTACCAGTAAGAGTTTTGAC 20299 Query 34695 AAAAATCTGCAT 34706 |||||||||||| Sbjct 20298 AAAAATCTGCAT 20287 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||||||| | | ||| | ||| |||||| ||||||||||| ||||| ||||| Sbjct 20970 GCCACCTCTAAGTCTGAGCACAAGATGCAGAGTGGATTCCTTTTGAATATTATAGTCTGA 20911 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | ||||| | |||||||| ||||| || ||||| || | ||||| || || || || Sbjct 20910 TAATGTTCTGCCATCTTCAAGCTGTTTTCCTGCAAAAATAAGTCGCTGCTGATCAGGAGG 20851 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTG-TTTTAACGATAAAATTGTGTCTTCGCTCTCCA 34657 | || || || ||| ||| ||| | |||| | ||| || || | ||| | Sbjct 20850 AATGCCTTCTTTATCT-TGAATTTTAGCCTTTACATTTTCAATAGTATCACTGGGCTCAA 20792 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||||| |||||||| || || || || || || || ||||| Sbjct 20791 CCTCTAGAGTTATTGTTTTACCAGTCAAGGTCTTTACGAATATTTGCAT 20743 Score = 91.5 bits (100), Expect = 9e-14 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 |||||||||||||| || || || || || || | ||||| ||||| ||||| |||||| Sbjct 20249 TCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAAT 20190 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-A 34634 || || | |||||| || || || | ||| || || ||| ||| ||| | || ||| Sbjct 20189 ATCAATCTCTGTTGATCAGGTGGGATTCCTTCTTTATCT-TGAATTTTAGCCTTTACGTT 20131 Query 34635 TAAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | ||| ||||| | | | || ||||| | ||||| || ||||| || | || || | Sbjct 20130 TTCAATGGTGTCGCTAGGT-TCAACTTCTAATGTTATTGTCTTACCAGTAAGAGTCTTTA 20072 Query 34694 CAAAAATCTGCAT 34706 |||| || ||||| Sbjct 20071 CAAAGATTTGCAT 20059 Score = 82.4 bits (90), Expect = 5e-11 Identities = 107/147 (73%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||||||| | | ||||| ||| ||||| || ||||| || || |||||||| Sbjct 21539 GCCTCCTCTAAGTCTAAGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATCTGA 21480 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | ||||| | || || ||||||||||| ||||| || | | ||| || || || || Sbjct 21479 TAATGTTCTACCATCCTCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGG 21420 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTG 34625 | ||||| |||||| ||| ||||| Sbjct 21419 AATGCCCTCTTTGTCT-TGAATTTTTG 21394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314147276868662