Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_028679.1 Length=40938 Score E Sequences producing significant alignments: (Bits) Value seq3139 84.2 6e-12 >seq3139 Length=44538 Score = 84.2 bits (92), Expect = 6e-12 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29000 AATTGTTCCGCCTCCTCAAGAGAACATCCAGTACTGAAACTAATACCCATAGCAGAAGCA 29059 |||| ||| || ||||| |||||| || || |||| | || || | |||| Sbjct 27317 AATTCTTCAGCGAACTCAATAGAACAACCGGTGTTGAACGCCAGGCCGGCTGCCGTAGCA 27258 Query 29060 CCATACTGATTAGCAAAAGCGCGTGGTTTAATGTCTGTACGCAATTGTTTGTACTTCCTG 29119 || ||||| | |||||| | | || ||||| || || |||| || ||||||||| || Sbjct 27257 CCGTACTGGTCAGCAAATGACAGCGGCTTAATATCCGTTCGCATCTGCTTGTACTTCTTG 27198 Query 29120 TGTTCAGGATGTTCTTTGTTATGACATTTATCATAAACAACCTCATAAGGTTCATTAAGC 29179 || || || ||||||| ||| || || || || || ||| |||| || | ||| || Sbjct 27197 TGCTCCGGGTGTTCTTCGTTGTGGCACTTCTCGTACACATCCTCGTACGATTCGCCCAG- 27139 Query 29180 GCACCA-GCCAAGCGATAACAGTGCATGTCCGT 29211 || | |||| ||||| ||||||||||| || Sbjct 27138 GCGGTACGCCAGTCGATAGCAGTGCATGTCAGT 27106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130644050681200