Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_028816.1 Length=43809 Score E Sequences producing significant alignments: (Bits) Value seq3139 518 9e-143 >seq3139 Length=44538 Score = 518 bits (574), Expect = 9e-143 Identities = 1039/1524 (68%), Gaps = 46/1524 (3%) Strand=Plus/Plus Query 38399 GGTATGCGCTTCTTGGGTTTTACGCTCACGGACATGCAGGCCGACATTGCAGAGTACATG 38458 || ||||||||| | || || |||||| ||||| || ||||| ||||||| Sbjct 8425 GGGATGCGCTTCCTCGGCTTCGAACTCACGCCAATGCAAAGGGATATTGCTTGGTACATG 8484 Query 38459 CAGAAGGGCCCCAGGAAGCGCATGGTGGCCGCGCAGCGTGGTGAGGCTAAGTCTACACTA 38518 ||| | ||||| ||||| |||||||||| || |||||||| ||||| ||||| || || Sbjct 8485 CAGCATGGCCCAAGGAACAGCATGGTGGCGGCACAGCGTGGGGAGGCCAAGTCCACCCTG 8544 Query 38519 GCTGCACTATACGCCGTCTGGAGGCTCATCCAGGACCAATCTTGCCGTATCCTGATTGTG 38578 ||||| || | ||| || |||| || |||| |||||||| | ||| | |||||||| Sbjct 8545 GCTGCGCTGTTCGCTGTGTGGAACCTTATCCGTGACCAATCCTACCGGGTACTGATTGTC 8604 Query 38579 TCTGGTGCAGAGAAGCAGGCATCTGACGTAGCGAACTTAATCATTCGTATGCTGGAAACC 38638 || |||| ||| |||||| || ||||| || ||| | || || ||| | || Sbjct 8605 TCCGGTGGTGAGGCGCAGGCGTCCGACGTTGCACTGTTAGTTATCCGAATGATTGAGCAG 8664 Query 38639 TGGCCGCTACTGTGCTACTTGAAGGCTGACCCTACTCGTGGGGACCGTACTTCATTCGAA 38698 ||| | || |||| || | | ||| || ||||| |||||||| || | || Sbjct 8665 TGGGGCTTGCTATGCTGGTTACGGCCAGACAGCACCCGTGGTGACCGTACATCGTACGCG 8724 Query 38699 GGCTATGATGTCAACTGCGACTTGAAACCGCTGGATAAGTCCGCCAGCGTAGCCTGCGTA 38758 |||||| || |||||||| |||| || |||||||| ||||||||||| || |||||| Sbjct 8725 AACTATGACGTACACTGCGACCTGAAGCCCCTGGATAAATCCGCCAGCGTGGCATGCGTA 8784 Query 38759 GGTATTACTGCATCGCTGCAAGGTAAGCGCGCGGACCTGCTGATTCCAGACGATATCGAG 38818 ||||| || ||||| |||| |||||||| || || |||||||||||||| ||||||||| Sbjct 8785 GGTATCACCGCATCCTTGCAGGGTAAGCGTGCTGATCTGCTGATTCCAGATGATATCGAG 8844 Query 38819 ACCACCAAGAACGGTTTAACGCAAACCCAGCGTGAGCAGCTGCTGATGATTTCTAAAGAC 38878 || || || |||||| | ||| || | ||||| ||||||| || || || ||| Sbjct 8845 ACTACGAACAACGGTCTGACGGCTACAAACCGTGAAGTGCTGCTGTTGCGCTCCAAGGAC 8904 Query 38879 TTCGCAGCTATCTGTACGCACGGGGATACGCTGTACCTGGGTACACCGCAGACCAAGGAC 38938 ||| | || || |||||||||| | || ||||||||||| |||||||||||||| ||| Sbjct 8905 TTCTCCGCGATTAATACGCACGGGAAGACTCTGTACCTGGGGACACCGCAGACCAAAGAC 8964 Query 38939 AGCATCTATAAAACCCTGCCGGGACGTGGCTTCGAGGTGCGAGTATGGCCCGGGCGCATT 38998 || ||||| || |||||| ||| |||||||| ||| | || |||||||| || ||| | Sbjct 8965 AGTATCTACAAGACCCTGGCGGCGCGTGGCTTTGAGATTCGCGTATGGCCTGGTCGCGTA 9024 Query 38999 CCGTCTGTTGAAATGGAAGAGCGATATGGAAGTACACTTGCTCCTTATATCCTGGAGCTT 39058 || | || ||| || || || || | | ||| | ||||| || | |||| | Sbjct 9025 CCTACCGTAGAAGAAGAGGAACGTTACGCCGGAACATTGGCTCCGATGATTCAGGAGATG 9084 Query 39059 ATTGAGCGCGGCTATAAACGCACCGGCTTCGGCGTCGATGGGACGCTAGGCGAGAGCACG 39118 ||| | |||| || || || |||||| | || || | | |||||| || Sbjct 9085 ATTCGGAACGGCGCGGCGCGTACAGGTTTCGGCCTGGACGGCAACCGCGGCGAGGTAACC 9144 Query 39119 GACACCGGGCGCTACGACGAGGATGCGCTGATTGAGAAGGAGCTGGACTTCGGTCCGGAA 39178 ||| || ||| ||| || |||| | || | ||||| || |||||||| || || Sbjct 9145 GACCCCATGCGTTACACGGAAGATGATTTAATCGGCAAGGAACTTGACTTCGGCCCTGAG 9204 Query 39179 GGCTTCCAGCTGCAGTACATGCTCGACACTACCCTGTCCGACCAAATGCGTACGCGTATC 39238 || |||||| ||||||||||||| || || | || | || | |||||| ||||| Sbjct 9205 GGGTTCCAGTTGCAGTACATGCTGGATACGTCACTAGCTGATGCACAGCGTACCCGTATT 9264 Query 39239 AAGCTTTCGGA---TATGCTGGTTTACTCCGGCAGCCAGGACTCCTCCCCGGAGACGTTC 39295 ||||| || || || ||| || |||| ||| | | || || | | Sbjct 9265 AAGCTCTCAGACGCCATTGTGGCGGCCTTGGGCA---CGGATGCTGCACCTGACTTGCTG 9321 Query 39296 TCCTACATCGC-GGACCGCCGGTACTTGTACCAGCACGAGCATGAGGGGATTATGGGTCA 39354 | |||| || |||| | | ||| ||| | | | ||| |||| | || Sbjct 9322 TACTACGCAGCAACCCCGCAGAATCGCGTA-CAGAGCCTTCCTAAGGTGATT---GAGCA 9377 Query 39355 GCAG---ATGTACTTCCCGGCATTCTACGG--GGAT-ATGCACTTGCCGTACCAGCATAA 39408 | || |||||| || ||| | ||| | || |||| | ||||| |||||||| Sbjct 9378 GGAGGTCATGTACAACCTGGCCGGTTCCGGCAGTATCATGC---TACCGTATCAGCATAA 9434 Query 39409 GGTGCTGGTGGTAGACCCGGCTGGCTGTGGTGGGGACGAAGTATCCTACGC-TGCTGGCG 39467 ||| |||| | |||||||| || ||||||||||||||||| ||| ||| ||| || | Sbjct 9435 GGTCATGGTCATCGACCCGGCCGGTTGTGGTGGGGACGAAGTGGCCTTCGCGTGC-GGTG 9493 Query 39468 GTGCTGCGAACTCGTACATTCACCTATTCTCCGTGGGCGGCTTCCAAGGAGGTATCAGCG 39527 | || |||||||||||||||||| || || || || | || |||||| | | Sbjct 9494 GGGCACTGAACTCGTACATTCACCTGTTTGGTGTTGGTGGTCTACAGGGAGGTTTGGTTG 9553 Query 39528 AAGAGAACATTGATAAACTGATTGACCTGTGCGTAGAGTTAGATATCCCGGATATGGTGG 39587 | |||||| | |||| || ||||||||| | ||||| | |||| ||||||| ||| Sbjct 9554 AGGAGAACCTGAATAAGCTCATTGACCTGGCTGAGGAGTTCGGTATCACGGATATTGTGA 9613 Query 39588 TGGAGAGCAACATGGGGCACGGTACTGTGTCTATGCTTATCCTGAA----CCGGTTACGG 39643 ||||| |||||||| ||||| || | |||||| | ||||| | || || Sbjct 9614 TGGAGGCAAACATGGGCCACGGCACGGCAAGTATGCTGCTGCTGAACGCCCTGGCTA--- 9670 Query 39644 GAGCGGCGCCTCGCCGGTGTTGGTGTAAGGGATCTGAATAACTCCA---CGCAGAAAGAG 39700 |||| || || | | ||||| |||| | | || ||| |||||| ||| Sbjct 9671 -AGCGCCGTATCACGAACATCGGTGTGCGGGA---CATTTACGCCAAGGGGCAGAAGGAG 9726 Query 39701 CGTCGTATAATCGACACAATCAGCCCCGTTACTCGTCGTCATCGCCTGGTGGTGCATGAG 39760 || ||||| || ||| | | ||||| || ||||| || | || || || ||| Sbjct 9727 CGCCGTATTATTGACTCCGTTAGCCCGGTATTCCGTCGGCACAAGTTCGTAGTTCACGAG 9786 Query 39761 CGTGCTATTCACGACGATATCAGCACTTGTATGGC-----GTACTCCCGAGATAGGCGTT 39815 || ||||| ||| ||| || | ||| || ||||||||| |||| | Sbjct 9787 CGCGCTAT---CGA-GATGGATGC-CGAGTACTGCGCCCGGTACTCCCGTGATAAGTTCC 9841 Query 39816 GGCTGTACTCTGCGTTCGCGCAGTTGTCCGGTATCACGTACGACCGCGGTAGTCTGGCGA 39875 | ||||||| || ||| |||||| | || || || ||||||||||| ||||| | Sbjct 9842 GTGTGTACTCCGCCTTCTTCCAGTTGGCTGGCATTACATACGACCGCGGCTCACTGGCTA 9901 Query 39876 AGGATGACCGAGCAGACGCAATCG 39899 ||||||||||||| || || |||| Sbjct 9902 AGGATGACCGAGCTGATGCTATCG 9925 Score = 178 bits (196), Expect = 4e-40 Identities = 750/1168 (64%), Gaps = 106/1168 (9%) Strand=Plus/Plus Query 11938 AGCTGGCGGCGCTGGAGAAGGACACTGGGACCTACTACTTGCGTGAAGTTCTTGACGCAA 11997 |||| || | || ||||||||||| || || |||||| | || |||| || |||| Sbjct 26762 AGCTCGCTTCTCTCGAGAAGGACACCGGAACGTACTACCTCCGACAAGTCCTGAACGCCG 26821 Query 11998 ATGGCGAAGTCAAAGAACGGAAGGGGATGTTGCAGTACGTAATCCCTGAACGTCCAGATG 12057 | || || ||||||| |||||| ||| |||| | | | ||| | | ||| Sbjct 26822 ACGGTACGGTGAAAGAACAGAAGGGCATGATGCAATTCAT------TGAT-GACAAGA-- 26872 Query 12058 GTTCCGGCATCATCCACCACCGCCTTAA---TACCTGCGCCACCGTAACCGGGCGCTTGA 12114 ||||| | |||||| |||| || |||| || || || || ||| ||| Sbjct 26873 ------GCATCGTGCACCACAGCCTGAACGTTACC---GCTACGGTGACTACGCGACTGA 26923 Query 12115 GT---AGCTCTAACCCGAACCTGCAGAACCTACCGCGCCCGGATGAGGACGGGGATGGGG 12171 || ||| ||||||||||| |||||||| || || |||| ||||| Sbjct 26924 GTTCAAGC---AACCCGAACCTCCAGAACCTCCCACGA---GATG-GGACG--------- 26967 Query 12172 TAGCTAAATCCAAGGTTAAGCAGGTATTCACCAGTCGCTTTGGCGATAACGGGCGAATCA 12231 ||||||||||||||| | |||||||| || || || || ||||| || |||| Sbjct 26968 --------TCCAAGGTTAAGCAGATGTTCACCAGCCGATTCGGTGAGAACGGTCGCATCA 27019 Query 12232 CCGAAGTTGACTACTCAGCACTGGAAGTAGTTATGTCCTGTGTGCATACCGGGGACACCA 12291 || || || ||||| ||||||||||| || ||| ||||| | || |||| | Sbjct 27020 TTGAGGTGGATTACTCCGCACTGGAAGTTGTAATGCTCTGTGCGATGACACGGGATATGG 27079 Query 12292 AGCTGCTGGGGCTGCTACAGGCAGGTACGGATATGCACTGTTACCGCCTAGCTTTCCGCG 12351 | |||||| |||| ||||||| | || || |||||||| || || || || | |||| Sbjct 27080 ACTTGCTGGCGCTGTTACAGGCTGACACTGACATGCACTGCTATCGACTGGCGTACCGCC 27139 Query 12352 AGGGATTACCGTATGAAGAAGTATATGAGCGCTGCCACAAC-AAGAAGCACGAGCTGCAT 12410 ||| | |||| || || || || ||| ||||||||| ||||| ||| | ||| Sbjct 27140 TGGGCGAATCGTACGAGGATGTGTACGAGAAGTGCCACAACGAAGAA-CACCCGGAGCAC 27198 Query 12411 CCGCTTTGGAAGGCAATGCGTACAGGTATTAAGGCTCCTAGCTTTGCAGCCCAGTATGGC 12470 | | ||| ||||| || | ||||||| | | ||||| | |||||| || Sbjct 27199 AAGAAGTACAAGCAGATGCGAACGGATATTAAGCCGCTGTCATTTGCTGACCAGTACGGT 27258 Query 12471 GCTACGGCTAAGGGGATTGCGTTTGCTACTGGATGTACGGTGGAATTTGCACAGGCTTTC 12530 |||||||| || | ||||| || || ||| | | || || || | | ||| Sbjct 27259 GCTACGGCAGCCGGCCTGGCGTTCAACACCGGTTGTTCTATTGAGTTCGCTGAAGAATTC 27318 Query 12531 TTGGACAACGAGGCTGCGCTGTTCCCGCAAACAATTGGCTTCCGCGCTGTTGTCAAGGAA 12590 || ||||| || | |||||||| | ||| |||||| || | | || Sbjct 27319 CAGGCGAACGAAGCGAAGATGTTCCCGACTTCCCGTGGGTTCCGCCAAGTCATTATTGAT 27378 Query 12591 GAGGTAGAACGTACCGGTGC---GGAGGGGCGCATGTACCGGGAGCAGGCTGACGACGGC 12647 |||||||| || || ||| | | ||| |||| |||| ||| ||| ||| |||| Sbjct 27379 GAGGTAGAGCGAACTGGTTCACTGCCGGGCAGCATCCACCGTGAGATGGCGGACAACGGT 27438 Query 12648 AGCTACCGAATCTACCGCATTGGG-----ACGT-GGACTAGCCCAGCCGGTGCCCGCTAC 12701 | | || | || || |||| ||| || | ||| || | || ||| Sbjct 27439 ACATGGCGTGTGTATCGTCGTGGGTACTACCGTGGGCCGAGCACAACATGT------TAC 27492 Query 12702 AGCTTCCGCCAGAAGGAGCAGTGGAAGGAAGTTGTGCCCGGGCAGCGTAAGCAGAAGGTA 12761 |||||||| ||| | || |||| ||| | |||||| | || Sbjct 27493 AGCTTCCGTCAGCACGACGTGTGG--------CGTG-------ATGGTAAGC---AAGTC 27534 Query 12762 ATGGACTACAAGGAAACTGAGATGGCGAACTACTGGTGCCAGGGGGAAGCGTTCTTCCTG 12821 ||||||||||| ||| ||||||| |||||| | |||||| || || ||| || Sbjct 27535 ATGGACTACAAACCAACCCAGATGGCTAACTACCCATTCCAGGGTGAGGCTGGGTTCATG 27594 Query 12822 ATG-GC---AGTAGCGGCCGGTATGGTTCTGCGCGCGCT-CCTGGCCCGT---GACTGGT 12873 ||| || |||| || | ||| ||||| |||| | | || ||||||| Sbjct 27595 ATGAGCGTAAGTATGGGGC-GTA----TCTGC---CGCTGGTTAATCAGTAAAGACTGGT 27646 Query 12874 TCGACAATCAGGTGTGCCTGATTACGAACGTACACGATGCACTGTATCTGGACAGCGCCA 12933 |||| |||||||| |||||| ||||||||||||||| ||| |||| || | Sbjct 27647 TCGATGGGCAGGTGTGTTTGATTAACAACGTACACGATGCAGCGTACATGGATGCAGCAA 27706 Query 12934 ACCCGGAGGTTGGACGTGAGGC-GAGCTTGCTGGTTAAGCAGTGCATGGAGGACGCACCT 12992 |||||||||| || |||||||| | || | || | ||| | ||||||||| ||||| Sbjct 27707 ACCCGGAGGTAGGTCGTGAGGCAGCCCTGGGTGCGAAGGCAAT-CATGGAGGATGCACCG 27765 Query 12993 AAGCGTATCCACCAGC-TCTGGCCTAACTACGGCATCATTGGCGAGGTGCCCTTCCCGGC 13051 | || || | | ||||||| | || || ||| | || ||||| ||||| || Sbjct 27766 CGGTACAT-GACGAACATCTGGCCGGAGTA---CAACATGGCGGATGTGCCTTTCCCAGC 27821 Query 13052 GGAAGCTGAAATGGGTACGAGCATGTAC 13079 | || || ||||| | ||||||||| Sbjct 27822 TGCGGCCGAGATGGGCAGCAGCATGTAC 27849 Score = 104 bits (114), Expect = 7e-18 Identities = 191/276 (69%), Gaps = 8/276 (3%) Strand=Plus/Plus Query 11316 TGGGAGCGCATGGATGCCTTGCTGGCTTGGGCATACTGCGAGTGGTTCGGTCTGTTCGTT 11375 |||||||| ||||| ||||||| | || ||||| |||| |||||||||| ||| Sbjct 26104 TGGGAGCGTTGTGATGCGCTGCTGGCATTCGCTTACTGTGAGTTCTTCGGTCTGTACGTA 26163 Query 11376 AATATGCCAATTGCGCGCAAGAACCAGGGGGAACAGGA-GCAGCGCATCCGTGAGATTAA 11434 | | | ||| |||||||| || |||||||| || | | | || ||| | Sbjct 26164 GACCGGGACGTGGCGAACAAGAACCTGGCCGAACAGGAAGCGGAGATTGCG-GAGTT--- 26219 Query 11435 GCAGGAGCTGCAGCAGTATATC---CCCAAGGACCTTCCGGATACTCTAGAATTCAACTT 11491 || | || || ||| | || || |||||| | || | | ||||||||||||| Sbjct 26220 GCGTGCGCAGCTACAGGAACTCTTGCCGAAGGACTTACCAGCTGAGCTAGAATTCAACTG 26279 Query 11492 CGGTTCGGACTTCCATATGTCTGCGCTGGTGTACGGAGGGCCTATCAAGTACCGCAAGAA 11551 ||| |||| ||| ||||| || |||||||| || ||||| | |||||| | || Sbjct 26280 GGGTAGCGACTACCACATGTCCGCCCTGGTGTATGGTGGGCCGGTGAAGTACAAGCACAA 26339 Query 11552 GGTGCCGTACGACCCGCCGCAGTATGTGAAGGTGGA 11587 ||| ||||||||||| |||||||| | |||| ||| Sbjct 26340 GGTTCCGTACGACCCACCGCAGTACATCAAGGAGGA 26375 Score = 96.9 bits (106), Expect = 1e-15 Identities = 209/310 (67%), Gaps = 16/310 (5%) Strand=Plus/Plus Query 25879 TCCAACACCTACCGTATTGACCGCCTGAACACCTCCTCGGTGAAGGGTCGTCGCTCTGGT 25938 || |||||| ||| ||||||| |||| ||| | || |||||||| || ||| Sbjct 41498 TCTAACACCGCCCGCCTTGACCGTATGAATACCGTGACCGTTAAGGGTCGCGGCGTCGGT 41557 Query 25939 GAGGCGCTGGATAGCACCCCGGTCCGT----AACGATAAGATGATTATCGTGGTGGATAC 25994 ||| |||||| || ||| || || |||||| || ||||| || ||||| Sbjct 41558 GAGAAGCTGGA----ACGTGAGTCTGTGAAGAATGATAAGCTGGTTATCACTGTTGATAC 41613 Query 25995 GGTGCTGTATATCCGCAAC--CCG--ATTGACTACCAGGATGACTGGACCGGTCCGGACT 26050 ||| ||| ||||| ||| || || | |||||||||||||| || ||| Sbjct 41614 CGTGACGTA----CGCAAGTACCGTCATGGATTGGCAGGATGACTGGACTTCGCCTGACC 41669 Query 26051 TCCTGACCGAGATGGGTCAGAACAACGGCTCTGAGTTCGCAGAGGTCTTCGACCAGGCGC 26110 | | | ||||| ||| ||| |||| | ||| ||| || | ||||||||||| | Sbjct 41670 GCTGGTCTGAGATTGGTACCAACCACGGTACCGAGCACGCGAAGCTGTTCGACCAGGCCC 41729 Query 26111 ACCTGATTCAGCTCATCAAGGGCCGTTCCTGGGTTGCCCCGGCGCACCTGAAACCGGCGT 26170 ||||||||||| | |||| || ||| |||| || || |||||||| ||||| | Sbjct 41730 ACCTGATTCAGTTGCAGAAGGCTCGCAAGTGGATTGCACCTGCACACCTGAAGCCGGCCT 41789 Query 26171 TCAATGACGG 26180 || ||||||| Sbjct 41790 TCTATGACGG 41799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139814688077428