Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_028836.1 Length=42508 Score E Sequences producing significant alignments: (Bits) Value seq3139 129 2e-25 >seq3139 Length=44538 Score = 129 bits (142), Expect = 2e-25 Identities = 371/571 (65%), Gaps = 21/571 (4%) Strand=Plus/Plus Query 39179 GGTGACCGTACCTCGGCCACCAGCTTCGACGTGAACTGGGCGTTGAAGGGAGTCGAGAAA 39238 ||||||||||| ||| | | | || ||||| |||| | ||||| | || ||| Sbjct 8704 GGTGACCGTACATCGTACGCGAACTATGACGTACACTGCGACCTGAAGCCCCTGGATAAA 8763 Query 39239 TCGGCTTCCATCAACTGCATCGGGATCACCGCTGCCCTCCAGGGTTACCGGGCTGACATC 39298 || || | | ||| | || |||||||| || | |||||| | || ||||| | Sbjct 8764 TCCGCCAGCGTGGCATGCGTAGGTATCACCGCATCCTTGCAGGGTAAGCGTGCTGATCTG 8823 Query 39299 CTGATTCCTGACGACATCGAGACCACGAAGAACGGCCTCACCGCCACCGAGCGGGCCAAG 39358 |||||||| || || |||||||| ||||| ||||| || || || || | || | | Sbjct 8824 CTGATTCCAGATGATATCGAGACTACGAACAACGGTCTGACGGCTACAAACCGTGAAGTG 8883 Query 39359 CTGACGCGGCAGTCGCAGGAATTCACCTCTATCTGTACCCATGGTAAGATTCTCTACCTA 39418 ||| | || || |||| ||| || | || ||| || || |||| ||| ||||| Sbjct 8884 CTGCTGTTGCGCTCCAAGGACTTCTCCGCGATTAATACGCACGGGAAGACTCTGTACCTG 8943 Query 39419 GGCACGCCGCAGTCCCGTGAGTCGATCTACAACGGTCTACCGGCGCGGGGCTTCCTGATG 39478 || || |||||| || || |||||||| || ||||||| ||||| ||| Sbjct 8944 GGGACACCGCAGACCAAAGACAGTATCTACAAGACCCTGGCGGCGCGTGGCTTTGAGATT 9003 Query 39479 CGCATCTGGCCTGGCCGCTTCCCGACCCTGGATGAGCAGGAACGCTACGGTGACTGGCTC 39538 ||| | |||||||| ||| | || ||| | || || ||||||| ||| || Sbjct 9004 CGCGTATGGCCTGGTCGCGTACCTACCGTAGAAGAAGAGGAACGTTAC--------GCCG 9055 Query 39539 GCACCTTCCATCCTAGCGCGCATTGCCCGCCTGGAGGAGAAAGGCCACAAC---CCGCGT 39595 | || || || || ||| | |||| || | || | ||||| Sbjct 9056 GAACATTGGCTC----CGATGATT------CAGGAGATGATTCGGAACGGCGCGGCGCGT 9105 Query 39596 ACTGGCAAGGGCCTGGATGGCACTCGTGGCTGGGCTGCCGATCCGCAGCGCTACAACGAA 39655 || || |||||||| |||| || ||| || |||| || ||| |||| ||| Sbjct 9106 ACAGGTTTCGGCCTGGACGGCAACCGCGGCGAGGTAACCGACCCCATGCGTTACACGGAA 9165 Query 39656 GAGGACCTGCTCGACAAGGAGCTTGACCAAGGCCCCGAGGGCTTCCAGCTTCAGTACATG 39715 || || | ||| |||||| |||||| ||||| ||||| |||||| | ||||||||| Sbjct 9166 GATGATTTAATCGGCAAGGAACTTGACTTCGGCCCTGAGGGGTTCCAGTTGCAGTACATG 9225 Query 39716 CTGGACACCAGCCTCGCCGACGAGCAGCGTA 39746 ||||| || || || || | ||||||| Sbjct 9226 CTGGATACGTCACTAGCTGATGCACAGCGTA 9256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135658993457960