Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_028848.1 Length=41805 Score E Sequences producing significant alignments: (Bits) Value seq3139 82.4 2e-11 >seq3139 Length=44538 Score = 82.4 bits (90), Expect = 2e-11 Identities = 252/382 (66%), Gaps = 6/382 (2%) Strand=Plus/Plus Query 39302 GGACATTGCAGACTACATGCAACATGGTTATAAGTACCGTATGGTGCAGGCACAGCGTGG 39361 ||| ||||| |||||||| ||||| | | || | |||||| |||||||||||| Sbjct 8466 GGATATTGCTTGGTACATGCAGCATGGCCCAAGGAACAGCATGGTGGCGGCACAGCGTGG 8525 Query 39362 GCAGGCTAAGAGTACCTTAGCTGCTTTATACTGTATCTGGCGCCTTATACAGCGTCCTA- 39420 | |||| ||| ||| | ||||| | | | | | ||| |||||| | | | || | Sbjct 8526 GGAGGCCAAGTCCACCCTGGCTGCGCTGTTCGCTGTGTGGAACCTTAT-CCGTGACCAAT 8584 Query 39421 AAGACCGTTGTTTGATTGTATCTGCTGGTGGTGATCAGGCTGACTCTATCGCACTGATTA 39480 |||| ||||||| || | ||||| | ||||| | | |||||| | Sbjct 8585 CCTACCGGGTACTGATTGTCTCCGGTGGTGAGGCGCAGGCGTCCGACGTTGCACTGTTAG 8644 Query 39481 TTACACGTATCATTAACCAATGGGACATCTTATGTTGGATGCGTCCAGATACGACCAGAG 39540 ||| || || ||| | || |||| | | |||| ||| | || ||||| | ||| | | Sbjct 8645 TTATCCGAATGATTGAGCAGTGGGGCTTGCTATGCTGGTTACGGCCAGACAGCACCCGTG 8704 Query 39541 GTGACAG-AGATAGTGCTAAGAACTATGATATTCACTGTGATCTTAAAGGTATTGATAAA 39599 ||||| | | || || | ||||||||| | ||||| || || || | |||||| Sbjct 8705 GTGACCGTACATCGTAC-GCGAACTATGACGTACACTGCGACCTGAAGCCCCTGGATAAA 8763 Query 39600 TCCGCTTCTGTATCATCAGTAGGTATTTCCGCACAGTTAGCA-GGTAAACGTGCTGACTT 39658 ||||| || ||| |||||||| ||||| || ||| ||||| |||||||| | Sbjct 8764 TCCGCCAGCGTGGCATGCGTAGGTATCACCGCATCCTT-GCAGGGTAAGCGTGCTGATCT 8822 Query 39659 TCTATTAGCAGACGATATTGAG 39680 || | |||| ||||| ||| Sbjct 8823 GCTGATTCCAGATGATATCGAG 8844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133413449017156