Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_028870.1 Length=43595 Score E Sequences producing significant alignments: (Bits) Value seq3139 567 2e-157 >seq3139 Length=44538 Score = 567 bits (628), Expect = 2e-157 Identities = 1082/1583 (68%), Gaps = 36/1583 (2%) Strand=Plus/Plus Query 38228 GCGCGAGGACATCGCGATGATGATGGCTGCCGCGCTGAGTGACTTCCGGGAATTTGCGTA 38287 ||| || || |||| |||||| || | || | | | || ||| || |||||| | Sbjct 8361 GCGGGAAGAGTTCGCCATGATGGTGTCCAGCGTGTTCACGGAATTCACCGACTTTGCGGA 8420 Query 38288 CATCGGTATGCGGTTCCTGGGTTTTACACTGACGGACATGCAGGCCGACATCGCAGAGTA 38347 | || ||||| ||||| || || ||| ||| ||||| || || || ||| Sbjct 8421 GCTGGGGATGCGCTTCCTCGGCTTCGAACTCACGCCAATGCAAAGGGATATTGCTTGGTA 8480 Query 38348 CATGCAGAAGGGCCCTAGGAAGCGCATGGTGGCCGCGCAGCGTGGTGAGGCTAAGTCTAC 38407 ||||||| | ||||| ||||| |||||||||| || |||||||| ||||| ||||| || Sbjct 8481 CATGCAGCATGGCCCAAGGAACAGCATGGTGGCGGCACAGCGTGGGGAGGCCAAGTCCAC 8540 Query 38408 ACTAGCTGCACTGTACGCAGTCTGGAGGCTTATCCAGGACCAATCCTGTCGTATCCTGAT 38467 || ||||| |||| ||| || |||| ||||||| |||||||||| || | ||||| Sbjct 8541 CCTGGCTGCGCTGTTCGCTGTGTGGAACCTTATCCGTGACCAATCCTACCGGGTACTGAT 8600 Query 38468 TGTGTCCGGTGCAGAGAAGCAAGCGTCAGACGTAGCGAACTTAATCATTCGTATGCTGGA 38527 ||| ||||||| ||| ||| ||||| ||||| || ||| | || || ||| | || Sbjct 8601 TGTCTCCGGTGGTGAGGCGCAGGCGTCCGACGTTGCACTGTTAGTTATCCGAATGATTGA 8660 Query 38528 AACCTGGCCGCTGCTGTGCTACTTGAAGGCTGACCCTACACGTGGGGACCGAACCTCCTT 38587 ||| |||| |||| || | | ||| || ||||| ||||| || || | Sbjct 8661 GCAGTGGGGCTTGCTATGCTGGTTACGGCCAGACAGCACCCGTGGTGACCGTACATCGTA 8720 Query 38588 TGAAGGTTACGACGTACACTGCGACCTGAAACCTCTGGATAAGTCCGCCAGCGTAGCCTG 38647 | || |||||||||||||||||||| || |||||||| ||||||||||| || || Sbjct 8721 CGCGAACTATGACGTACACTGCGACCTGAAGCCCCTGGATAAATCCGCCAGCGTGGCATG 8780 Query 38648 TGTAGGTATCACTGCATCCCTACAGGGGAAGCGCGCGGACCTGCTGATTCCAGATGATAT 38707 ||||||||||| |||||| | ||||| ||||| || || |||||||||||||||||||| Sbjct 8781 CGTAGGTATCACCGCATCCTTGCAGGGTAAGCGTGCTGATCTGCTGATTCCAGATGATAT 8840 Query 38708 CGAGACCACCAAGAACGGTTTAACGCAAACCCAGCGTGAGCAGCTGCTGATGGTTTCTAA 38767 |||||| || || |||||| | ||| || | ||||| ||||||| || || || Sbjct 8841 CGAGACTACGAACAACGGTCTGACGGCTACAAACCGTGAAGTGCTGCTGTTGCGCTCCAA 8900 Query 38768 AGACTTCGCAGCTATCTGTACGCACGGGGATACGCTGTACCTGGGTACACCACAGACCAA 38827 |||||| | || || |||||||||| | || ||||||||||| ||||| |||||||| Sbjct 8901 GGACTTCTCCGCGATTAATACGCACGGGAAGACTCTGTACCTGGGGACACCGCAGACCAA 8960 Query 38828 GGACAGTATCTACAAAACCCTGCCGGGGCGTGGCTTCGAGGTCCGCGTGTGGCCGGGGCG 38887 |||||||||||||| |||||| ||| ||||||||| ||| | ||||| ||||| || || Sbjct 8961 AGACAGTATCTACAAGACCCTGGCGGCGCGTGGCTTTGAGATTCGCGTATGGCCTGGTCG 9020 Query 38888 CATTCCGTCTGTTGAAATGGAAGAGCGATATGGAAGTACACTTGCTCCTTATATACTGGA 38947 | | || | || ||| || || || || | | ||| | ||||| || | ||| Sbjct 9021 CGTACCTACCGTAGAAGAAGAGGAACGTTACGCCGGAACATTGGCTCCGATGATTCAGGA 9080 Query 38948 GCTCATTGAGCGCGGCTATAAACGCACCGGCTTCGGTGTCGACGGGACGCTAGGGGAGAG 39007 | | ||| | |||| || || || ||||| | ||||| | | || ||| Sbjct 9081 GATGATTCGGAACGGCGCGGCGCGTACAGGTTTCGGCCTGGACGGCAACCGCGGCGAGGT 9140 Query 39008 CACGGACCCCGGGCGCTATGACGAGGATGCGCTGATTGAGAAGGAGCTGGACTTTGGTCC 39067 || |||||| ||| || || |||| | || | ||||| || ||||| || || Sbjct 9141 AACCGACCCCATGCGTTACACGGAAGATGATTTAATCGGCAAGGAACTTGACTTCGGCCC 9200 Query 39068 GGAAGGCTTCCAGCTGCAGTACATGCTAGACACCACCCTGTCCGA-CCAGATGCGTACGC 39126 || || |||||| ||||||||||||| || || | || | || || | |||||| | Sbjct 9201 TGAGGGGTTCCAGTTGCAGTACATGCTGGATACGTCACTAGCTGATGCACA-GCGTACCC 9259 Query 39127 GTATCAAGCTTTCGGA---TATGCTGGTTTATTCCGGCAGCCAGGACTCTTCCCCGGAGA 39183 |||| ||||| || || || ||| | |||| ||| || | || || Sbjct 9260 GTATTAAGCTCTCAGACGCCATTGTGGCGGCCTTGGGCA---CGGATGCTGCACCTGACT 9316 Query 39184 CGTTCTCCTACATCGCGGACCGCCGGTACCTNNNNNNNNNNNNNNNNNAGGGGATTATGG 39243 | | | |||| || || | | | | ||| |||| | Sbjct 9317 TGCTGTACTACGCAGCAACCCCGCAGAATCGCGTACAGAGCCTTCCTAAGGTGATT---G 9373 Query 39244 GTCAGCAG---ATGTACTTCCCGGCATTCTACGG--GGA-CATGCACCTGCCGTACCAGC 39297 ||| || |||||| || ||| | ||| | | |||| || ||||| |||| Sbjct 9374 AGCAGGAGGTCATGTACAACCTGGCCGGTTCCGGCAGTATCATG---CTACCGTATCAGC 9430 Query 39298 ATAAGGTGCTGGTGGTGGACCCGGCTGGGTGTGGCGGGGACGAAGTGTCCTACGC-TGCT 39356 ||||||| |||| | |||||||| || ||||| |||||||||||| ||| ||| ||| Sbjct 9431 ATAAGGTCATGGTCATCGACCCGGCCGGTTGTGGTGGGGACGAAGTGGCCTTCGCGTGC- 9489 Query 39357 GGCGGTGCTGCGAACTCGTACATTCACCTATTCTCCGTGGGCGGCTTCCAAGGAGGTATC 39416 || || || |||||||||||||||||| || || || || | || |||||| | Sbjct 9490 GGTGGGGCACTGAACTCGTACATTCACCTGTTTGGTGTTGGTGGTCTACAGGGAGGTTTG 9549 Query 39417 AGCGAAGAGAACATTGATAAACTGATTGACCTGTGCGTAGAGTTAGACATCCCGGATATG 39476 || |||||| | |||| || ||||||||| | ||||| | ||| ||||||| Sbjct 9550 GTTGAGGAGAACCTGAATAAGCTCATTGACCTGGCTGAGGAGTTCGGTATCACGGATATT 9609 Query 39477 GTGGTGGAGAGTAACATGGGGCACGGTACCGTGTCTATGCTTATCCTGAACCGGCTGCGG 39536 ||| ||||| |||||||| ||||| || | |||||| | |||||| ||| Sbjct 9610 GTGATGGAGGCAAACATGGGCCACGGCACGGCAAGTATGCTGCTGCTGAACGCCCTGGCT 9669 Query 39537 GAGCGCCGTCTCGCCGGTATCGGCGTAAGGGACCTGAACAACTCCACGCAGAAGGAGCGT 39596 |||||||| || | ||||| || ||||| | || | |||||||||||| Sbjct 9670 AAGCGCCGTATCACGAACATCGGTGTGCGGGACATTTACGCCAAGGGGCAGAAGGAGCGC 9729 Query 39597 CGTATCATTGACACAATCAGCCCAGTTACTCGTCGGCACCGCCTGGTAGTGCATGAGCGA 39656 ||||| |||||| | | ||||| || ||||||||| | ||||| || ||||| Sbjct 9730 CGTATTATTGACTCCGTTAGCCCGGTATTCCGTCGGCACAAGTTCGTAGTTCACGAGCGC 9789 Query 39657 GCTATTCACGACGATATCAGCACTTGTATGGC-----GTACTCCCGCGATAGACGTT--G 39709 ||||| ||| ||| || | ||| || ||||||||| ||| | ||| | Sbjct 9790 GCTAT---CGA-GATGGATGC-CGAGTACTGCGCCCGGTACTCCCGTGAT--AAGTTCCG 9842 Query 39710 GCTGTACTCTGCGTTCGCGCAGTTGTCAGGTATCACGTACGACCGCGGTAGTCTGGCTAA 39769 ||||||| || ||| |||||| | || || || ||||||||||| |||||||| Sbjct 9843 TGTGTACTCCGCCTTCTTCCAGTTGGCTGGCATTACATACGACCGCGGCTCACTGGCTAA 9902 Query 39770 GGATGACCGGGCAGACGCAATCG 39792 ||||||||| || || || |||| Sbjct 9903 GGATGACCGAGCTGATGCTATCG 9925 Score = 159 bits (176), Expect = 1e-34 Identities = 756/1179 (64%), Gaps = 128/1179 (11%) Strand=Plus/Plus Query 10872 AGCTGGCGGCGCTGGAGAAGGATACCGGCACTTACTATTTGCGAGAGGTCCTGGACGCAG 10931 |||| || | || |||||||| ||||| || ||||| | ||| | |||||| |||| | Sbjct 26762 AGCTCGCTTCTCTCGAGAAGGACACCGGAACGTACTACCTCCGACAAGTCCTGAACGCCG 26821 Query 10932 AAGGTAAGGTCAAAGAGCGGAAGGGGATGCTGCAGTACGTAATCCCGGAGCGTCCCGATG 10991 | |||| ||| ||||| | |||||| ||| |||| | | | |||| Sbjct 26822 ACGGTACGGTGAAAGAACAGAAGGGCATGATGCAATTCATT---------------GATG 26866 Query 10992 GTTCCGGCATCATTCACCACCGCCTTAA---TACCTGCGCCACCGTAACCGGGCGCTTGA 11048 ||||| | |||||| |||| || |||| || || || || ||| ||| Sbjct 26867 ACAAGAGCATCGTGCACCACAGCCTGAACGTTACC---GCTACGGTGACTACGCGACTGA 26923 Query 11049 GT---AGCTCTAACCCTAACTTGCAGAACCTGCCCCGCCCGGATGAGGATGGCGACGGTG 11105 || ||| ||||| ||| | |||||||| || || ||||| |||| Sbjct 26924 GTTCAAGC---AACCCGAACCTCCAGAACCTCCCACGA---------GATGG-GACG--- 26967 Query 11106 TGGCTAAATCCAAGGTGAAGCAGGTGTTCACCAGCAGATTCGGGGACAACGGACGTATCA 11165 |||||||| |||||| ||||||||||| ||||||| || ||||| || |||| Sbjct 26968 --------TCCAAGGTTAAGCAGATGTTCACCAGCCGATTCGGTGAGAACGGTCGCATCA 27019 Query 11166 CTGAGGTTGACTACTCGGCACTGGAAGTGGTTATG-TCT-TGTGTACACACGGGTGACAA 11223 |||||| || ||||| ||||||||||| || ||| ||| || | |||||| || | Sbjct 27020 TTGAGGTGGATTACTCCGCACTGGAAGTTGTAATGCTCTGTGCGATGACACGG--GATAT 27077 Query 11224 GAAACTGCTGGGACTGCTGCAGAGTGGTACGGATATGCACTGTTACCGCCTAGCTTTCCG 11283 | | |||||| ||| | ||| || || || |||||||| || || || || | ||| Sbjct 27078 GGACTTGCTGGCGCTGTTACAGGCTGACACTGACATGCACTGCTATCGACTGGCGTACCG 27137 Query 11284 TGAAGGCTTGGAT--TACGACGAGGTGTACTACCGCTGTCACGA-TAAGACTTACCAAGA 11340 ||| | || ||||| || |||||| | || ||| | |||| ||| || Sbjct 27138 CCTGGGC--GAATCGTACGAGGATGTGTACGAGAAGTGCCACAACGAAGA-ACACCCGGA 27194 Query 11341 CTATAGTACGTGGAAGACAAAGCGTTCGCATATCAAGACCCCTAGC-TTTGCTGCGCAGT 11399 | | | || ||| | ||| || |||| ||| || || | ||||||| |||| Sbjct 27195 GCACAAGAAGTACAAGCAGATGCGAACGGATATTAAG-CCGCTGTCATTTGCTGACCAGT 27253 Query 11400 ATGGGGCTTCCGCAAGGGGTGTAGCCTTCGCTGCGGGTTGTACAGTGGAATTCGCACAAG 11459 | || ||| | ||| || | || ||| | |||||| | | || ||||| ||| Sbjct 27254 ACGGTGCTACGGCAGCCGGCCTGGCGTTCAACACCGGTTGTTCTATTGAGTTCGCTGAAG 27313 Query 11460 AGTTCCTAGATAACGAAGAGCGTATGTTCCCAACAACCATCGGCTTCCGCGCTATTGTCA 11519 | |||| | ||||||| | |||||||| || || || |||||| | | | Sbjct 27314 AATTCCAGGCGAACGAAGCGAAGATGTTCCCGACTTCCCGTGGGTTCCGCCAAGTCATTA 27373 Query 11520 AGGAAGAGGTAGAGCGTACCGGTGC---GGAGGGTCGCATGTACCGGGAGCAGGCTGACG 11576 || ||||||||||| || ||| | | ||| |||| |||| ||| ||| ||| Sbjct 27374 TTGATGAGGTAGAGCGAACTGGTTCACTGCCGGGCAGCATCCACCGTGAGATGGCGGACA 27433 Query 11577 ACGGCAGCTACCGAATCTACCGCATTGGG-----ACGT-GGACTAGTCCAGCCGGTGCCC 11630 |||| | | || | || || |||| ||| || | || || | || Sbjct 27434 ACGGTACATGGCGTGTGTATCGTCGTGGGTACTACCGTGGGCCGAGCACAACATGT---- 27489 Query 11631 GCTACAGTTTCCGCCAGAAAGAGCAGTGGAAGGAAGTTGTGCCTGGGCAGCGTAAGCAGA 11690 ||||| ||||| ||| | || |||| ||| | |||||| Sbjct 27490 --TACAGCTTCCGTCAGCACGACGTGTGG--------CGTG-------ATGGTAAGC--- 27529 Query 11691 AGGTAATGGACTACAAGGAAACTGAGATGGCTAACTACTGGTGTCAGGGGGAAGCATTCT 11750 | || ||||||||||| ||| |||||||||||||| | ||||| || || | Sbjct 27530 AAGTCATGGACTACAAACCAACCCAGATGGCTAACTACCCATTCCAGGGTGAGGCTGGGT 27589 Query 11751 TCCTGATG-GC---AGTGGCGGCCGGTATGGTCCTGCGCGCACTCCTGG----CCCGT-- 11800 || ||||| || ||| || | |||| |||| || |||| | || Sbjct 27590 TCATGATGAGCGTAAGTATGGGGC-GTAT----CTGC-CG-----CTGGTTAATCAGTAA 27638 Query 11801 -GACTGGTTCGACAATCAGGTGTGCCTGATTACGAACGTACACGATGCATTGTATCTGGA 11859 ||||||||||| |||||||| |||||| ||||||||||||||| ||| |||| Sbjct 27639 AGACTGGTTCGATGGGCAGGTGTGTTTGATTAACAACGTACACGATGCAGCGTACATGGA 27698 Query 11860 CAGCGCCAACCCGGAGGTTGGACGTGAGGCGAGCCTGCTGGTT----AAGCAGTGCATGG 11915 || ||||||||||| || |||||||| |||| |||| | | ||| | ||||| Sbjct 27699 TGCAGCAAACCCGGAGGTAGGTCGTGAGGC-AGCC--CTGGGTGCGAAGGCAAT-CATGG 27754 Query 11916 AGGATGCACCTAAGCGTATCCACCAGC-TCTGGCCTAACTACGGTATCATTGGTGAGGTG 11974 |||||||||| | || || | | ||||||| | ||| | ||| | || ||| Sbjct 27755 AGGATGCACCGCGGTACAT-GACGAACATCTGGCCGGAGTAC---AACATGGCGGATGTG 27810 Query 11975 CCCTTCCCGGCGGAAGCTGAAATGGGTACGAGCATGTAC 12013 || ||||| || | || || ||||| | ||||||||| Sbjct 27811 CCTTTCCCAGCTGCGGCCGAGATGGGCAGCAGCATGTAC 27849 Score = 104 bits (114), Expect = 6e-18 Identities = 207/306 (68%), Gaps = 8/306 (3%) Strand=Plus/Plus Query 24324 TCCAACACCTACCGTATTGACCGTCTGAACACCTCCTCGGTGAAAGGTCGTCGCTCCGGT 24383 || |||||| ||| |||||||| |||| ||| | || || ||||| || |||| Sbjct 41498 TCTAACACCGCCCGCCTTGACCGTATGAATACCGTGACCGTTAAGGGTCGCGGCGTCGGT 41557 Query 24384 GAGGCGCTGGATAGCACTCCGGTCCGT----AACGATAAGATGATTATCGTGGTGGATAC 24439 ||| |||||| || ||| || || |||||| || ||||| || ||||| Sbjct 41558 GAGAAGCTGGA----ACGTGAGTCTGTGAAGAATGATAAGCTGGTTATCACTGTTGATAC 41613 Query 24440 GGTGCTGTATATCCGTAACCCGATCGACTACCAGGATGACTGGACCGGTCCGGACTTCCT 24499 ||| ||| ||| | || || | |||||||||||||| || ||| | Sbjct 41614 CGTGACGTACGCAAGTACCGTCATGGATTGGCAGGATGACTGGACTTCGCCTGACCGCTG 41673 Query 24500 GACCGAGCTGGGTCAGAACAACGGCTCCGAGTTCGCAGAGACCTTCGACCAGGCGCACCT 24559 | | ||| | ||| ||| |||| ||||| ||| || ||||||||||| ||||| Sbjct 41674 GTCTGAGATTGGTACCAACCACGGTACCGAGCACGCGAAGCTGTTCGACCAGGCCCACCT 41733 Query 24560 GATTCAGCTCATCAAGGGTCGTTCGTGGGTTGCACCGGCGCACCTGAAACCGGCGTTCAA 24619 ||||||| | |||| ||| |||| ||||||| || |||||||| ||||| ||| | Sbjct 41734 GATTCAGTTGCAGAAGGCTCGCAAGTGGATTGCACCTGCACACCTGAAGCCGGCCTTCTA 41793 Query 24620 CGACGG 24625 ||||| Sbjct 41794 TGACGG 41799 Score = 91.5 bits (100), Expect = 4e-14 Identities = 191/282 (68%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 18038 GGTACAGGCATGAAGTATGACGCAGGCAAACCCAGAATGGACCTGTTACTGGATGGGTGC 18097 || || || ||||||||||| | || || || | ||||| ||| | || | || || Sbjct 33538 GGCACTGGTATGAAGTATGATGGTGGTAAGCCACGTATGGAACTGCTGGTGCAGGGTTGT 33597 Query 18098 CCGAATGCGTTGCTGC--GTA-TCAGTGATGTGCTGACCTTCGGGGCCCAGAAGTATGCG 18154 ||||| || || || ||| ||| || || |||||||| ||| ||||||| || Sbjct 33598 CCGAACGCCCTGGAGCAGGTAGCCAG---CGTCCTAACCTTCGGTGCCGAGAAGTACGCC 33654 Query 18155 GCACACAGTTGGCACACAGTGGCCGAAGGTAAGTCCCGCTACAAGGCCGCACTACTGCGG 18214 ||||| || ||||| || || | | ||| | ||| ||| ||||||||| ||||| Sbjct 33655 GCACATAGCTGGCAGACGGTACCTAACGGTGACGACCGTTACCTGGCCGCACTGCTGCGT 33714 Query 18215 CACCTCACAGCACACGCTATGGGAGAGACGCTAGACTCGGAGAGCGGTTTACCGCACCTG 18274 ||||| || || | || |||||| | ||| ||||||| || | |||||| Sbjct 33715 CACCTTACCGCCGTTGGTAAAGGAGAGGCAACTGACCCGGAGAGTGGCATGAGCCACCTG 33774 Query 18275 GCGCACGCCGCTTGCTGTGCGTTATTTATTCTAGAACTGGAG 18316 || |||| || || ||| | || ||||| || |||||| Sbjct 33775 GCTCACGTAGCATGTAATGCTCTGTTCATTCTGGAGCTGGAG 33816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139131122628876