Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2770 150 4e-31 >seq2770 Length=41231 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||||||||||| || || |||||||| ||||||||||| | || || | || Sbjct 20502 TCTTAATACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATCTGATAGTGTGCGACC 20443 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| |||||||| || || || || || | ||||| |||||||||| ||||| || Sbjct 20442 ATCTTCTAGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTT 20383 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || ||||| ||| || ||||| || |||||| ||| ||||| || || || Sbjct 20382 ATCTTGAATCTTAGCTTTGACATTTTCAATTGTGTCACTTGGTTCCACCTCAAGTGTAAT 20323 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || ||||| || ||||| | |||||| Sbjct 20322 GGTCTTACCAGTAAGAGTTTTGACAAAAATCTGCAT 20287 Score = 145 bits (160), Expect = 2e-29 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||||| | || | || ||||| || || ||||||||||||||||| | | ||| Sbjct 22634 ACGAAGTCGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCTGACAAGGT 22575 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || ||||||||||||||||| || || |||||||| || ||||| ||||| |||| || Sbjct 22574 TCTGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGGGGAATGCC 22515 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || || |||||||||||| ||| || || || ||||| ||| | |||||| || || Sbjct 22514 CTCTTTATCCTGGATCTTTGCTTTTACATTCTCAATGGTATCACTGGGTTCAACTTCTAG 22455 Query 211073 AGTGATCGTCTTTCC 211087 ||| || || || || Sbjct 22454 AGTAATAGTTTTACC 22440 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || || || || | ||| || || || ||||| ||||||||||| || | | || | | Sbjct 19136 AGCCTAAGAACCAAGTGTAGTGTCGATTCTTTCTGGATGTTATAGTCTGACAATGTACGT 19077 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||| || |||||||| || || || || | || ||||||||||| | |||||| Sbjct 19076 CCATCTTCGAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCT 19017 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||| || || || || ||||| ||||||||| |||||||| | ||| Sbjct 19016 TTATCCTGAATTTTAACCTTAACATTTTCTATGGTGTCACTAGGCTCAACCTCTAATGTG 18957 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || ||||| || || || || || ||||| | ||||||| Sbjct 18956 ATGGTCTTGCCAGTAAGTGTTTTCACAAAGATCTGCATT 18918 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || || |||||||| |||||||| || | ||| || | |||||||| ||||| Sbjct 19806 GTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAAAGCGTACGCCCATCTTCTAGCTG 19747 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || || || || || ||||| || |||||||| | ||||| || || || || || Sbjct 19746 TTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGTATGCCTTCTTTATCTTGAATTTT 19687 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 | ||| || ||||| || |||||| | |||||||| | || || || || || || Sbjct 19686 TGCTTTTACATTTTCAATTGTGTCACTGGACTCAACCTCTAATGTTATTGTTTTACCAGT 19627 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || ||||||||||| | |||||| Sbjct 19626 AAGTGTCTTTACAAAGATCTGCAT 19603 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||||||||| || || ||||||||||| || || || | |||||| | |||||| Sbjct 21182 AGAACAAGGTGAAGTGTTGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCGACCATCT 21123 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || ||||| || || || | ||||| ||||| |||| |||||| || || Sbjct 21122 TCTAGCTGTTTTCCTGCAAATATGAGCCTCTGTTGATCAGGTGGAATTCCTTCTTTATCT 21063 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || ||||| || || ||| ||||| || | || || || Sbjct 21062 TGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGCTCAACTTCTAATGTTATGGTT 21003 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| ||||| | ||||| Sbjct 21002 TTCCCAGTAAGAGTCTTAACAAAAATTTGCAT 20971 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| || || ||||| || || || ||||| | ||| || | |||||| || || ||| Sbjct 19349 TGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAAAGAGTACGTCCATCCTCAAGTTGC 19290 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || || || | |||||||| ||||| |||| ||||||||||| || || || Sbjct 19289 TTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATTTTA 19230 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| ||||| |||||||||||| |||||| || ||||| || || || || || Sbjct 19229 GCTTTAACGTTCTCGATGGTGTCACTTTGTTCAACTTCTAGAGTTATTGTTTTGCCAGTT 19170 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | || || || || | |||||| Sbjct 19169 AAGGTTTTAACGAAAATCTGCAT 19147 Score = 123 bits (136), Expect = 6e-23 Identities = 163/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || ||||||||||| || || ||||| ||||| || || | || || Sbjct 20280 ACGAAGCCGGAGAACTAGGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAGAGT 20221 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || ||||| || || || || | | ||||| ||||| || | ||| Sbjct 20220 ACGGCCATCTTCTAGTTGCTTACCAGCAAATATCAATCTCTGTTGATCAGGTGGGATTCC 20161 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTC 211069 ||| || || || || || || |||||||| |||||||| ||| |||||| || Sbjct 20160 TTCTTTATCTTGAATTTTAGCCTTTACGTTTTCAATGGTGTC---GCTAGGTTCAACTTC 20104 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || || ||||| || || |||||||||||||| | ||||| Sbjct 20103 TAATGTTATTGTCTTACCAGTAAGAGTCTTTACAAAGATTTGCAT 20059 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| || | || | || | ||| || ||||||||||||||||| || | | || Sbjct 20736 ACGAAGCCTCAAAACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGATAAAGT 20677 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 ||| |||||||| | ||||| || || |||||||| ||||| || || ||||||| || Sbjct 20676 CCTGCCATCTTCTAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATCCC 20617 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| || || || || || ||| || ||||| || || ||| ||| || || || Sbjct 20616 TTCTTTATCTTGAATTTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCTACTTCAAG 20557 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || || || || | ||| || || || | ||||| Sbjct 20556 AGTTATTGTTTTACCAGTTAAAGTTTTAACGAATATTTGCAT 20515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156897313884110