Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2770 93.3 4e-14 >seq2770 Length=41231 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||||||||| | || ||||| || || || |||||||| || ||||| || | | Sbjct 19829 CCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAA 19770 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || |||||||| || ||||| || ||||| ||||| || | || Sbjct 19769 AGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGT 19710 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCGTCGCCACCGTATCGCTCGACTCCAC 39236 | || ||||| | | ||| ||| || ||| | | | | || || || ||||| || Sbjct 19709 ATGCCTTCTTTAT-CTTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAAC 19651 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | || || |||| || || || || || |||||||| ||||| Sbjct 19650 CTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 82.4 bits (90), Expect = 7e-11 Identities = 103/139 (74%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAA-CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAAT 39112 || ||||||||| ||| ||| ||||| ||| || || |||||||||||||| |||| Sbjct 21542 CATGCCTCCTCT-AAGTCTAAGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAAT 21484 Query 39113 CGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGG 39172 | | | ||||| | || || || ||||| || ||||| ||||| | |||||| || | Sbjct 21483 CTGATAATGTTCTACCATCCTCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTG 21424 Query 39173 TGGGCACGCTCTCTTTGTC 39191 || | || ||||||||| Sbjct 21423 GTGGAATGCCCTCTTTGTC 21405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428750840502182