Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq2770 134 3e-26 seq136325 91.5 4e-13 seq1944 87.8 4e-12 >seq2770 Length=41231 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| || ||||| || ||||||||||| ||||| | ||| || || | || ||||| Sbjct 20961 AAGTCTGAGCACAAGATGCAGAGTGGATTCCTTTTGAATATTATAGTCTGATAATGTTCT 20902 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||| ||||| || || || || |||||||| || || || || ||||| ||||| Sbjct 20901 GCCATCTTCAAGCTGTTTTCCTGCAAAAATAAGTCGCTGCTGATCAGGAGGAATGCCTTC 20842 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 || ||||| || || ||| ||| ||| || || || || || || |||| || Sbjct 20841 TTTATCTTGAATTTTAGCCTTTACATTTTCAATAGTATCACTGGGCTCAACCTCTAGAGT 20782 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || ||||| || |||| ||| | |||||| Sbjct 20781 TATTGTTTTACCAGTCAAGGTCTTTACGAATATTTGCAT 20743 Score = 125 bits (138), Expect = 2e-23 Identities = 163/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| |||| || | || | ||| ||||||||||||| || || || | ||||| Sbjct 20736 ACGAAGCCTCAAAACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGATAAAGT 20677 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||||| ||||| ||||| |||||||| ||||| || || || ||||| || Sbjct 20676 CCTGCCATCTTCTAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATCCC 20617 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||| || ||||| || ||| || || ||| ||| || || || | ||| || || | Sbjct 20616 TTCTTTATCTTGAAT-TTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCTACTTCAA 20558 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || || |||||||| | ||| | |||||| Sbjct 20557 GAGTTATTGTTTTACCAGTTAAAGTTTTAACGAATATTTGCAT 20515 Score = 123 bits (136), Expect = 6e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 || || ||||| || || || ||||||||||| | ||| || || | | ||| | ||| Sbjct 19589 CTAAGTACAAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGATAGAGTGCGACCA 19530 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 ||||| || || || || || ||||| | | || || ||||| ||||| |||||||| Sbjct 19529 TCTTCAAGTTGTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTA 19470 Query 225619 TCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||| || |||||| || ||| ||| || ||||| || ||| || |||||||| || Sbjct 19469 TCTTGAAT-TTTTGCTTTAACATTTTCTATCGTGTCACTGGGTTCTACTTCTAACGTAAT 19411 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || || || ||||| | ||| | ||||||| Sbjct 19410 GGTTTTACCAGTTAATGTTTTAACGAAGATTTGCATT 19374 Score = 123 bits (136), Expect = 6e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 |||||| || || || || ||||| ||||||||||| | ||||||||| | || ||||| Sbjct 21530 AAGTCTAAGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATCTGATAATGTTCT 21471 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 ||||| ||||| || || ||||| || ||||| | || || || || ||||| || || Sbjct 21470 ACCATCCTCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTC 21411 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 |||||||| || ||| ||||||| ||| || || || | || || ||||| || Sbjct 21410 TTTGTCTTGAATTTTTGCCTTCACATTTTCTATAGTATCACTAGGCTCAACTTCTAAAGT 21351 Query 225675 GATCGTCTTGCCCGTCAA 225692 || ||||| || || || Sbjct 21350 AATAGTCTTTCCTGTAAA 21333 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || ||||| ||||| ||||| ||||| | ||||| || | || ||| Sbjct 20280 ACGAAGCCGGAGAACTAGGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAGAGT 20221 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||||||| ||||| ||||| || || | || ||||| || || || || || Sbjct 20220 ACGGCCATCTTCTAGTTGCTTACCAGCAAATATCAATCTCTGTTGATCAGGTGGGATTCC 20161 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || ||||| || || ||| || ||| |||||||| | ||| || ||||| Sbjct 20160 TTCTTTATCTTGAATTTTAGCCTTTACGTTTTCAATGGTGTCGCTAGGTTCAACTTCTAA 20101 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | ||| |||| || | |||||| Sbjct 20100 TGTTATTGTCTTACCAGTAAGAGTCTTTACAAAGATTTGCAT 20059 Score = 120 bits (132), Expect = 7e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564 |||||||| || || ||||||||||| | || ||||| | | || | ||||||||| Sbjct 20495 ACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATCTGATAGTGTGCGACCATCTTCT 20436 Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624 |||||||| ||||| || || |||| ||||| || || ||||||||||| || ||||| Sbjct 20435 AGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTTATCTTGA 20376 Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684 ||||| || ||| ||| || ||||| | |||||| || | || || ||||| Sbjct 20375 ATCTTAGCTTTGACATTTTCAATTGTGTCACTTGGTTCCACCTCAAGTGTAATGGTCTTA 20316 Query 225685 CCCGTCAAAGTTTT 225698 || || | |||||| Sbjct 20315 CCAGTAAGAGTTTT 20302 Score = 118 bits (130), Expect = 3e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || |||||||| || | ||||||||| | | ||| | ||||| || || ||| Sbjct 19349 TGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAAAGAGTACGTCCATCCTCAAGTTGC 19290 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| || || | |||||||| || || |||||||||||||||||||| || ||| Sbjct 19289 TTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAAT-TTT 19231 Query 225631 TGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||| | | | ||||||||||| ||| || |||| || || || ||||| || Sbjct 19230 AGCTTTAACGTTCTCGATGGTGTCACTTTGTTCAACTTCTAGAGTTATTGTTTTGCCAGT 19171 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 || ||||| | ||| | ||||| Sbjct 19170 TAAGGTTTTAACGAAAATCTGCAT 19147 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 ||| | ||| |||||||| || || ||||||||||||| |||||| || | | |||| Sbjct 21189 AAGCCGCAGAACAAGGTGAAGTGTTGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCG 21130 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||||||||| || || || || || || | ||||| || || ||||| ||||| Sbjct 21129 ACCATCTTCTAGCTGTTTTCCTGCAAATATGAGCCTCTGTTGATCAGGTGGAATTCCTTC 21070 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 || ||||| ||||| ||| ||| ||| || || || | || || ||||| || Sbjct 21069 TTTATCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGCTCAACTTCTAATGT 21010 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || | ||| || | || | |||||| Sbjct 21009 TATGGTTTTCCCAGTAAGAGTCTTAACAAAAATTTGCAT 20971 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 |||| || | ||| || || ||||||||||| | || || || | | || | |||| Sbjct 19817 CTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAAAGCGTACGCCCA 19758 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 ||||||||||| || ||||| || || || ||||| || || || || || ||||| || Sbjct 19757 TCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGTATGCCTTCTTTA 19698 Query 225619 TCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||| || |||||| || ||| ||| || ||||| || || || ||||| || || Sbjct 19697 TCTTGAAT-TTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAACCTCTAATGTTAT 19639 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || | || |||| || | ||||| Sbjct 19638 TGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 >seq136325 Length=1798 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/102 (80%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATC-AGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTG 370730 |||||| || |||||||| | | || ||||||||| | | |||| ||| || || |||| Sbjct 803 TTCAGGGTGTCCAAAAAAACCAAAACAAATGTTGAAATAAAATAGAATCCCCACCTCCTG 744 Query 370731 ATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 ||||||||||| |||||||||||||| ||||||||||| Sbjct 743 CAGGATCAAAAAATGAAGTATTAAAATTTCGATCAGTTAAAA 702 >seq1944 Length=51255 Score = 87.8 bits (96), Expect = 4e-12 Identities = 127/180 (71%), Gaps = 7/180 (4%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | || || || ||| | || | ||||| |||||||| | ||| || ||| Sbjct 48067 CAATTATATAATGTGATTGTAACTGGTCATGCATTTGTTATAAATTTTTT-------ATG 48015 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 ||| || |||| || || || || || ||||| ||||||||||| | || | || ||| Sbjct 48014 CCGATTTTGATTGGAGGGTTTGGGAACTGATTAGTTCCTTTAATATTGGGACCACCAGAT 47955 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 ||||| ||||| | | || ||| | || |||||||||||||| | || ||| || || Sbjct 47954 ATGGCCTTTCCTCGTATAAATAATTTGAGATTTTGATTACTACCATCATCGTTAATTTTA 47895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1190211587438916