Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq8063 179 3e-40 >seq8063 Length=21912 Score = 179 bits (198), Expect = 3e-40 Identities = 162/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 ||| || ||||| || || || || ||||| ||||||||||| || |||| ||||||||| Sbjct 13761 TACCAAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATAT 13820 Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAAC 5050 ||| | | ||| |||| || | ||||| ||||| ||||||||||| ||||||||| Sbjct 13821 AAAATGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAAC 13880 Query 5051 TTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATA 5110 |||||||||||||||||| || ||||| |||||||| ||||| ||| ||||| | || Sbjct 13881 TTCTTCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTA 13940 Query 5111 CTGAATCGGAAGTATGACAAATCT 5134 || ||| |||| || |||||||| Sbjct 13941 CTCAATTGGAAATACAACAAATCT 13964 Score = 132 bits (146), Expect = 4e-26 Identities = 103/123 (84%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 4811 GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGC 4870 ||||| || || || || ||||| |||||||||||||||||||||| |||||| || || Sbjct 13317 GTCTTTGATGTATGTATCAATTAGAAGGCTATACATTTCAGAATGTACATTTTCAATTGC 13376 Query 4871 AATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTC 4930 || || ||||| ||||||||||| |||||||||||||| ||||| | || ||||||||| Sbjct 13377 TATTTGGAATCCATAAAAGCATCTTGCTTCTGTTACTTGCACTTCTTGACTAAATCTTTC 13436 Query 4931 TAC 4933 || Sbjct 13437 CAC 13439 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 |||| ||| || |||||||||||||| || |||| | ||| ||| ||||||||||| Sbjct 8997 AATCTGTCTGCAACAAATTCTATATATTGTTTCATTAATTCATTGTTCATTCCAATTAAA 9056 Query 4437 CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATA 4496 ||| |||| || | |||||| || | |||||| |||| || || || || ||||| Sbjct 9057 GCCACTGGTAAAGCTTCTGTCAAGAATTGTTGTTCAATAGCCACTGCATCAGTAATTATT 9116 Query 4497 TCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAA 4556 | | | | | | || | |||||||| ||||||| | ||||| | || |||||| Sbjct 9117 TGTACAACTCTTTTTTCTGTGGGTTTATTAACTAAGTGGCTAAACATGAGGCATGCAAAA 9176 Query 4557 TCACAATGCAAACC 4570 |||||||| | ||| Sbjct 9177 TCACAATGAAGACC 9190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426259458684062