Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq8063 178 2e-39 seq9609 116 5e-21 seq139299 113 6e-20 seq16555 113 6e-20 >seq8063 Length=21912 Score = 178 bits (196), Expect = 2e-39 Identities = 166/211 (79%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 48523 CCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAA 48582 ||||||| ||||| || ||||||||||| || |||||||||||||| | ||| |||| Sbjct 13763 CCAAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATATAA 13822 Query 48583 AATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 48642 ||| |||||| | || | | ||| | ||||||||| | |||||| |||| ||| |||| Sbjct 13823 AATGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAACTT 13882 Query 48643 CTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATT 48702 ||||| | |||||||| || || ||||||||||||||||| | ||| ||||| ||| | Sbjct 13883 CTTCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTACT 13942 Query 48703 GGATTGGGAAAATAACAAATCTATTTGGATT 48733 ||||| || | |||||||||| |||||| Sbjct 13943 CAATTGGAAATACAACAAATCTACGTGGATT 13973 Score = 100 bits (110), Expect = 4e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 47946 TTTTTAAATCCTAATTCT-GAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCAT 48004 |||| | |||| |||||| | ||| | ||| |||||||| |||||||||||| |||||| Sbjct 8973 TTTTCACATCCCAATTCTAGCAATAA-TCTGTCTGCAACAAATTCTATATATTGTTTCAT 9031 Query 48005 CATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTC 48064 | |||| |||||||| || | ||||||| ||| || || | || | |||||| Sbjct 9032 TAATTCATTGTTCATTCCAATTAAAGCCACTGGTAAAGCTTCTGTCAAGAATTGTTGTTC 9091 Query 48065 GATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAA 48124 |||| || ||||| ||||| | || ||| || | ||| || | || Sbjct 9092 AATAGCCACTGCATCAGTAATTATTTGTACAACTCTTTTTTCTGTGGGTTTATTAACTAA 9151 Query 48125 ATGTTTAAACATTAAACATGCAAAATCACAATGAAGACC 48163 || ||||||| | ||||||||||||||||||||||| Sbjct 9152 GTGGCTAAACATGAGGCATGCAAAATCACAATGAAGACC 9190 Score = 100 bits (110), Expect = 4e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 48391 TTTCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATAT 48450 ||||| | | ||||| | ||| ||||| |||| ||| ||||||||||| || || | || Sbjct 13307 TTTCAGTCTTGTCTTTGATGTATGTATCAATTAGAAGGCTATACATTTCAGAATGTACAT 13366 Query 48451 TTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTAC 48510 |||||||||| || || ||||| ||||| ||||| |||||||| | || || || || Sbjct 13367 TTTCAATTGCTATTTGGAATCCATAAAAGCATCTTGCTTCTGTTACTTGCACTTCTTGAC 13426 Query 48511 AAAATCGTTC 48520 ||||| ||| Sbjct 13427 TAAATCTTTC 13436 >seq9609 Length=20973 Score = 116 bits (128), Expect = 5e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 |||||||||||||| || ||||| | |||||||| || || |||||||| || | ||| Sbjct 20543 TGAAATTCTCCAGATAAAACTCTTCTTGTGTAAATGTTGCTAGTATATGGCTCAATGGAT 20602 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || || || || ||||||||||||||||| ||||| || || | || | ||| Sbjct 20603 TCATTATTACCTAATATCTGAGCAGTAGAAGCAGTGGGCATTGGAGCAAGTAAAAGGCTA 20662 Query 77247 TTTCTGAGACCATG 77260 || || |||||||| Sbjct 20663 TTCCTCAGACCATG 20676 >seq139299 Length=970 Score = 113 bits (124), Expect = 6e-20 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 |||||| | ||||||||||| ||||| ||||| || ||||||||||| || | || || Sbjct 88 AGTTCCGGAGTTAAATAATGTTGGAGAAGCATGAGTGAACCATTTTTCTGACATTAAATG 147 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517 ||| |||||||| || | || || || ||||||||| || | ||| | |||||| Sbjct 148 GTAAGTTTCAATGGCAGCATCAATATCATCAGAATGAATTCCGACAGATACTCTCATCAA 207 Query 78518 CATATGCTGAGGTCTTTCAACC 78539 ||| |||||||| ||||||||| Sbjct 208 CATGTGCTGAGGCCTTTCAACC 229 >seq16555 Length=11409 Score = 113 bits (124), Expect = 6e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 77924 TTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGA 77983 |||||||| || ||||| |||| | ||||||||||||| || ||||| | Sbjct 11254 TTCAAATTTTTCGCCCCAGCAGTCATGAAGACCAGGGCATTCATCAGGACACATAAGACT 11195 Query 77984 CCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 78043 ||| |||||| | |||||||||||| || ||||| || ||||| | ||| || Sbjct 11194 CCACATTTCATCTTTTTCAACTCGTTTCATGAAAAGATCTGGAATCCACAAGGCATAGAA 11135 Query 78044 TAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCAT 78103 | ||||| | | || ||||| ||||||||||| || || | || ||||| || | Sbjct 11134 CAAATCTCTTGCCCGTTGCTCTTCTTTTCCTGTATTTTTCTTTAATTCAAGAAATTCAAA 11075 Query 78104 AATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTC 78150 ||||||| |||||| || |||| ||| ||||| | ||||||||| Sbjct 11074 TATATCAGCATGCCAAGGCTCTAAATAAATTGCAAATGCTCCAGGTC 11028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693350544384960