Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq8063 167 3e-36 seq9609 116 5e-21 seq139299 111 2e-19 seq16555 96.9 5e-15 >seq8063 Length=21912 Score = 167 bits (184), Expect = 3e-36 Identities = 163/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 47013 CAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072 |||||| ||||| || ||||||||||| || ||||||||||| || | ||| ||||| Sbjct 13764 CAAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATATAAA 13823 Query 47073 ATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTC 47132 || |||||| || | | | ||| | ||||||||| | |||||| |||| ||| ||||| Sbjct 13824 ATGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAACTTC 13883 Query 47133 TTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTG 47192 |||| | ||||| || || || ||||||||||||||||| | ||| ||||| | || | Sbjct 13884 TTCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTACTC 13943 Query 47193 GATCGGAAAAATAACAAATCTATTTGGATT 47222 || ||||| | |||||||||| |||||| Sbjct 13944 AATTGGAAATACAACAAATCTACGTGGATT 13973 Score = 100 bits (110), Expect = 4e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 46435 TTTTTAAATCCTAATTCT-GAAATCAGTCTATCTGCAACGAATTCTATATACGTTTTCAT 46493 |||| | |||| |||||| | ||| | ||| |||||||| ||||||||||| |||||| Sbjct 8973 TTTTCACATCCCAATTCTAGCAATAA-TCTGTCTGCAACAAATTCTATATATTGTTTCAT 9031 Query 46494 CATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTC 46553 | |||| |||||||| || | || |||| ||| || || | || | |||||| Sbjct 9032 TAATTCATTGTTCATTCCAATTAAAGCCACTGGTAAAGCTTCTGTCAAGAATTGTTGTTC 9091 Query 46554 AATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAA 46613 ||||| || ||||| | ||||| | ||| ||| || | ||| || | || Sbjct 9092 AATAGCCACTGCATCAGTAATTATTTGTACAACTCTTTTTTCTGTGGGTTTATTAACTAA 9151 Query 46614 ATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCC 46652 || ||||||| | |||||||||||||||||||| || Sbjct 9152 GTGGCTAAACATGAGGCATGCAAAATCACAATGAAGACC 9190 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 46891 TCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCC 46950 ||||| | |||||||| |||| ||| ||||||||||| ||||| | |||||||| || Sbjct 13318 TCTTTGATGTATGTATCAATTAGAAGGCTATACATTTCAGAATGTACATTTTCAATTGCT 13377 Query 46951 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC 47009 || || ||||| ||||| ||||||||||| || | || || ||| || ||||| ||| Sbjct 13378 ATTTGGAATCCATAAAAGCATCTTGCTTCTGTTACTTGCACTTCTTGACTAAATCTTTC 13436 >seq9609 Length=20973 Score = 116 bits (128), Expect = 5e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 |||||||||||||| || ||||||| |||||||| || || |||||||| || | ||| Sbjct 20543 TGAAATTCTCCAGATAAAACTCTTCTTGTGTAAATGTTGCTAGTATATGGCTCAATGGAT 20602 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| || || || || |||||||| |||||||| ||||| || || | || | ||| Sbjct 20603 TCATTATTACCTAATATCTGAGCAGTAGAAGCAGTGGGCATTGGAGCAAGTAAAAGGCTA 20662 Query 75842 TTTCTGAGACCATG 75855 || || |||||||| Sbjct 20663 TTCCTCAGACCATG 20676 >seq139299 Length=970 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 |||||| | ||||| ||||| ||||| |||||||||||||||||||| || | || || Sbjct 88 AGTTCCGGAGTTAAATAATGTTGGAGAAGCATGAGTGAACCATTTTTCTGACATTAAATG 147 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 ||| |||||||| | || || ||||| ||||||||| |||| || | |||||| Sbjct 148 GTAAGTTTCAATGGCAGCATCAATATCATCAGAATGAATTCCGACAGATACTCTCATCAA 207 Query 77113 CATATGCTGAGGTCGTTCTAC 77133 ||| |||||||| | ||| || Sbjct 208 CATGTGCTGAGGCCTTTCAAC 228 >seq16555 Length=11409 Score = 96.9 bits (106), Expect = 5e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 76519 TTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGA 76578 |||||||| || ||||| |||| | |||||| ||||||| |||||||| | Sbjct 11254 TTCAAATTTTTCGCCCCAGCAGTCATGAAGACCAGGGCATTCATCAGGACACATAAGACT 11195 Query 76579 CCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 76638 |||| |||||| | ||| |||||||| || ||||| || ||||| | ||| || Sbjct 11194 CCACATTTCATCTTTTTCAACTCGTTTCATGAAAAGATCTGGAATCCACAAGGCATAGAA 11135 Query 76639 TAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCAT 76698 | ||||| | | | ||||| ||||||||||| || || | || || || || | Sbjct 11134 CAAATCTCTTGCCCGTTGCTCTTCTTTTCCTGTATTTTTCTTTAATTCAAGAAATTCAAA 11075 Query 76699 AATATCAGAATGCCATGGTTCTAGATATATCGC 76731 ||||||| |||||| || |||| ||| || || Sbjct 11074 TATATCAGCATGCCAAGGCTCTAAATAAATTGC 11042 Score = 86.0 bits (94), Expect = 9e-12 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 76160 GGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTT-CTGACAACTACTTTAAC 76218 |||| ||| |||||||| | ||| |||||||| || | ||| ||| | |||||| Sbjct 8784 GGAACAGGATAATAATTTACATCAATAATTTTGTTCAAATTAACTGTGAT-TACTTTTGT 8726 Query 76219 CACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATCACAAACATATTAAGAGCTAT 76278 ||| || |||| ||| ||||||||||||| |||| | ||| | |||| ||||||| Sbjct 8725 CACCTCTTTTAATTTCTCAAAATCAAATTTTTGATCTTTAACATATCTATTGAGAGCTAA 8666 Query 76279 AGATGCTAGATTACAAACGGCTACCT 76304 ||||| | |||||| || || |||| Sbjct 8665 TGATGCCAAATTACACACAGCAACCT 8640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711581482212480