Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2770 131 4e-25 >seq2770 Length=41231 Score = 131 bits (144), Expect = 4e-25 Identities = 168/229 (73%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 151890 CTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCA 151949 || || ||||||||||| ||||| |||||||| || || || || | || ||| | ||| Sbjct 19589 CTAAGTACAAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGATAGAGTGCGACCA 19530 Query 151950 TCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||||| || ||| || || ||||| | ||||||||| || | | ||||||||||| Sbjct 19529 TCTTCAAGTTGTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTA 19470 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTA 152066 |||||||||||| ||| ||| | |||| |||| ||| |||||||| | ||| Sbjct 19469 TCTTGAATTTTTGCTTTAACATTTTCTATCGTGTC---ACTGGGTTCTACTTCTAACGTA 19413 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTA 152114 || ||||| || || | || || ||||||| |||||| ||| |||| Sbjct 19412 ATGGTTTTACCAGTTAATGTTTTAACGAAGATTTGCATTCCACCTCTTA 19364 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| || || |||||||||||||| |||||||| || |||||||| | ||| ||| Sbjct 21532 CTAAGTCTAAGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATCTGATAATGTT 21473 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| ||||| ||| || || || |||||||||||||| || | | || || Sbjct 21472 CTACCATCCTCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCC 21413 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || |||||||||||| || ||| | |||| | || | ||| ||||| | | Sbjct 21412 TCTTTGTCTTGAATTTTTGCCTTCACATTTTCTATAGTATCACTAGGCTCAACTTCTAAA 21353 Query 152064 GTAATAGTTTTGCCCGT 152080 |||||||| || || || Sbjct 21352 GTAATAGTCTTTCCTGT 21336 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||| | ||| ||||| | |||||| ||||| || |||||||| || | ||| || Sbjct 20051 CTCAGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGATAATGTA 19992 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| || || || || || || | |||||| || || | | |||||| Sbjct 19991 CGACCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGGAATTCCT 19932 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||||||||| ||| ||| | || | | || | ||||||||| | Sbjct 19931 TCTTTGTCTTGAATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTACTTCTAAG 19872 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||||||||| || || | |||||||| || | ||||||| Sbjct 19871 GTAATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCATT 19830 Score = 109 bits (120), Expect = 1e-18 Identities = 149/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| | ||| || |||||||||||||| || || | |||||| || |||||||||| Sbjct 20718 ATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGATAAAGTCCTGCCATCTTCTAATTG 20659 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || || || |||||||| | ||||| || | | || ||||| || ||||||||||| Sbjct 20658 CTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATCCCTTCTTTATCTTGAATTTT 20599 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTGCC 152077 ||| ||| | |||| | || ||| |||||||||||||| || ||||| || Sbjct 20598 GGCTTTAACATTTTCTATCGTATC---ACTTGGTTCTACTTCAAGAGTTATTGTTTTACC 20542 Query 152078 CGTGAGAGTCTTCACGAAGACCTGCAT 152104 || | ||| || ||||| | ||||| Sbjct 20541 AGTTAAAGTTTTAACGAATATTTGCAT 20515 Score = 107 bits (118), Expect = 4e-18 Identities = 159/224 (71%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||||||| |||||||| ||||| || || ||||| || || || || | ||| ||| Sbjct 20963 CTAAGTCTGAGCACAAGATGCAGAGTGGATTCCTTTTGAATATTATAGTCTGATAATGTT 20904 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || |||||||| || ||| || || || ||||| | |||||| || | | || ||| Sbjct 20903 CTGCCATCTTCAAGCTGTTTTCCTGCAAAAATAAGTCGCTGCTGATCAGGAGGAATGCCT 20844 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || ||||||||||| || ||| | || | | || ||| ||| || || Sbjct 20843 TCTTTATCTTGAATTTTAGCCTTTACATTTTCAATAGTATC---ACTGGGCTCAACCTCT 20787 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || ||||| || || | ||||| ||||| | ||||| Sbjct 20786 AGAGTTATTGTTTTACCAGTCAAGGTCTTTACGAATATTTGCAT 20743 Score = 104 bits (114), Expect = 5e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || ||||| |||||||| || || | || || | |||||||| | Sbjct 19125 CAAG-TGTAGTGTCGATTCTTTCTGGATGTTATAGTCTGACAATGTACGTCCATCTTCGA 19067 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || || || |||||||||||||| | | ||||||||| || || |||| Sbjct 19066 GTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCTTTATCCTGAA 19007 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || ||| | |||| | |||| | ||| || || | || || || |||| Sbjct 19006 TTTTAACCTTAACATTTTCTATGGTGTCACTAGGCTCAACCTCTAATGTGATGGTCTTGC 18947 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || || || ||||| |||| ||||||| Sbjct 18946 CAGTAAGTGTTTTCACAAAGATCTGCATT 18918 Score = 100 bits (110), Expect = 7e-16 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 ||||| ||||| ||||| |||||||| ||||| ||||| | || || | ||||||||| Sbjct 20495 ACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATCTGATAGTGTGCGACCATCTTCT 20436 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || || || || || ||||| || || | | || ||||| || |||||| Sbjct 20435 AGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTTATCTTGA 20376 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTT 152072 || || ||||||| | || | |||| ||| || || ||||| ||||| || Sbjct 20375 ATCTTAGCTTTGACATTTTCAATTGTGTC---ACTTGGTTCCACCTCAAGTGTAATGGTC 20319 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || || | |||||| Sbjct 20318 TTACCAGTAAGAGTTTTGACAAAAATCTGCAT 20287 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| ||||| || || ||||||||||| ||||| || | | |||| |||||| Sbjct 21182 AGAACAAGGTGAAGTGTTGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCGACCATCT 21123 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| ||| || || || || |||||||| || || | | |||||||| || ||| Sbjct 21122 TCTAGCTGTTTTCCTGCAAATATGAGCCTCTGTTGATCAGGTGGAATTCCTTCTTTATCT 21063 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| | || | | || | ||| ||||| | || || ||| Sbjct 21062 TGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGCTCAACTTCTAATGTTATGGTT 21003 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||| || || | ||||| Sbjct 21002 TTCCCAGTAAGAGTCTTAACAAAAATTTGCAT 20971 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || ||||||||||| || ||||| |||||||| || | | ||| | ||||| Sbjct 20271 GAGAACTAGGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATC 20212 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 |||||| || || || || || | ||||| || || | | ||||||||| || || Sbjct 20211 TTCTAGTTGCTTACCAGCAAATATCAATCTCTGTTGATCAGGTGGGATTCCTTCTTTATC 20152 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||||||| || || | || | | |||| | || ||||| | || || || Sbjct 20151 TTGAATTTTAGCCTTTACGTTTTCAATGGTGTCGCTAGGTTCAACTTCTAATGTTATTGT 20092 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||| || |||| ||||| Sbjct 20091 CTTACCAGTAAGAGTCTTTACAAAGATTTGCAT 20059 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || ||||| |||||||| ||||| || || | | || | ||||||||||| Sbjct 19809 CAAG-TGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAAAGCGTACGCCCATCTTCTA 19751 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || || || || || | ||||| || | | || ||||| || ||||||| Sbjct 19750 GCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGTATGCCTTCTTTATCTTGAA 19691 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||||| ||| ||| | || | ||| ||| | ||| || || | || || ||||| Sbjct 19690 TTTTTGCTTTTACATTTTCAATTGTGTCACTGGA--CTCAACCTCTAATGTTATTGTTTT 19633 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || |||| |||||| Sbjct 19632 ACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 91.5 bits (100), Expect = 3e-13 Identities = 129/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| |||||||| || ||||||||||| ||||| | || ||||| |||||||| || Sbjct 22616 ATGCAGAGTAGATTCCTTTTGGATGTTATAATCTGACAAGGTTCTGCCATCTTCCAGCTG 22557 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || || || |||||||| | ||| || || | | || || || || || || || || Sbjct 22556 CTTACCAGCAAAGATAAGACGCTGTTGATCAGGGGGAATGCCCTCTTTATCCTGGATCTT 22497 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTGCC 152077 | ||| ||| |||| | | | || ||| || ||||| |||||||||||||| || Sbjct 22496 TGCTTTTACATTCTCAATGGTATC---ACTGGGTTCAACTTCTAGAGTAATAGTTTTACC 22440 Score = 86.0 bits (94), Expect = 1e-11 Identities = 154/224 (69%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || ||||| || | |||||| || || ||||| || || |||||||| | | ||| Sbjct 19367 CTTAGCCTGAGAACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAAAGAGTA 19308 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | ||||| || || || || || || || | | || || || | | || ||| Sbjct 19307 CGTCCATCCTCAAGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGAATACCT 19248 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 ||||| ||||||||||| ||| || |||| | | |||| ||| || ||||| Sbjct 19247 TCCTTGTCTTGAATTTTAGCTTTAACGTTCTCGATGGTGTC---ACTTTGTTCAACTTCT 19191 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || |||||||| || | || || ||||| | |||||| Sbjct 19190 AGAGTTATTGTTTTGCCAGTTAAGGTTTTAACGAAAATCTGCAT 19147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151576483691194