Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2770 143 6e-29 >seq2770 Length=41231 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || |||||||| || || || || || || || ||||||||| ||| Sbjct 20290 CAGATTTTTGTCAAAACTCTTACTGGTAAGACCATTACACTTGAGGTGGAACCAAGTGAC 20349 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| |||||||| || |||||||| || ||||| || || || Sbjct 20350 ACAATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAACAG 20409 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| || || || || || ||||| |||||||| | || || | ||||||||| | Sbjct 20410 AGACTCATTTTTGCTGGTAAGCAGCTAGAAGATGGTCGCACACTATCAGATTATAACATT 20469 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| ||||| || ||||| || ||| | ||| Sbjct 20470 CAAAAAGAATCTACACTTCACCTTGTATTAAGATTGAGA 20508 Score = 140 bits (154), Expect = 8e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| |||||| | || || ||||| || || || || || ||| || Sbjct 20518 CAAATATTCGTTAAAACTTTAACTGGTAAAACAATAACTCTTGAAGTAGAACCAAGTGAT 20577 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || ||||| || |||||||| || ||||| || |||||| Sbjct 20578 ACGATAGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGGATTCCTCCAGATCAGCAA 20637 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || || | |||||||| |||||| | | || |||||| || Sbjct 20638 CGTCTTATCTTTGCTGGTAAGCAATTAGAAGATGGCAGGACTTTATCAGACTATAACATC 20697 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 |||||||||||||| | ||| | |||||||| || Sbjct 20698 CAAAAAGAATCAACTTTACATTTAGTTTTGAGGCT 20732 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || ||||| || || | ||||| || | ||| Sbjct 19606 CAGATCTTTGTAAAGACACTTACTGGTAAAACAATAACATTAGAGGTTGAGTCCAGTGAC 19665 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||| ||||| || |||||||| || ||||| || |||||| Sbjct 19666 ACAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGCATACCTCCTGATCAGCAA 19725 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || |||||||| |||||||| | || ||| | || |||||| | Sbjct 19726 CGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGGCGTACGCTTTCAGACTATAACATT 19785 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135 ||||||||||| |||||||| | |||||||| Sbjct 19786 CAAAAAGAATCTACACTGCACTTGGTTTTGAG 19817 Score = 132 bits (146), Expect = 1e-25 Identities = 163/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 ||||| ||||| || || | || || ||||| || || || ||||| || || ||| Sbjct 20746 CAAATATTCGTAAAGACCTTGACTGGTAAAACAATAACTCTAGAGGTTGA--GCCCAGTG 20803 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | || || || || || || || ||||| || |||||||| || ||||| || |||| Sbjct 20804 ATACTATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGCATTCCTCCTGATCAGC 20863 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | |||||||| || || ||||||||||| |||||||| || || | | || ||||| Sbjct 20864 AGCGACTTATTTTTGCAGGAAAACAGCTTGAAGATGGCAGAACATTATCAGACTATAATA 20923 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | ||||| ||||| || ||||||||||| | ||||| ||| Sbjct 20924 TTCAAAAGGAATCCACTCTGCATCTTGTGCTCAGACTTAGA 20964 Score = 127 bits (140), Expect = 5e-24 Identities = 162/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || |||||||| || || || || || ||||| | ||||| || || || Sbjct 18922 CAGATCTTTGTGAAAACACTTACTGGCAAGACCATCACATTAGAGGTTGA--GCCTAGTG 18979 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| || || || || || |||||||| ||||||||||||||||| ||||||| Sbjct 18980 ACACCATAGAAAATGTTAAGGTTAAAATTCAGGATAAAGAAGGAATCCCTCCTGACCAGC 19039 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || || || || || || || |||||||||||| | || | | || |||||| Sbjct 19040 AGAGGCTGATTTTTGCTGGCAAGCAACTCGAAGATGGACGTACATTGTCAGACTATAACA 19099 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| |||||||| ||||| || | ||| | || || ||| Sbjct 19100 TCCAGAAAGAATCGACACTACACTTGGTTCTTAGGCTGAGA 19140 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||| | || || ||||| || || || || || ||| ||| Sbjct 19150 CAGATTTTCGTTAAAACCTTAACTGGCAAAACAATAACTCTAGAAGTTGAACAAAGTGAC 19209 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||||||||| ||| || ||||| ||||| ||||| || || || || || ||| Sbjct 19210 ACCATCGAGAACGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAACAA 19269 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || || || || || |||||| | |||||| | ||||| || | Sbjct 19270 CGTTTAATTTTTGCTGGTAAGCAACTTGAGGATGGACGTACTCTTTCAGATTACAATATT 19329 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||||||||||| || ||| | ||| | || || ||| Sbjct 19330 CAGAAAGAATCAACCCTTCATTTAGTTCTCAGGCTAAGA 19368 Score = 123 bits (136), Expect = 6e-23 Identities = 161/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 |||||||| || || ||||| || || ||||| || || | || || || || || Sbjct 20974 CAAATTTTTGTTAAGACTCTTACTGGGAAAACCATAACATTAGAAGTTGA--GCCTAGTG 21031 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | || || || || || || |||||||| || ||||||||||| || || || || | Sbjct 21032 ATACTATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCACCTGATCAAC 21091 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || || || || ||||||||||| |||||||| | || ||| | || || || Sbjct 21092 AGAGGCTCATATTTGCAGGAAAACAGCTAGAAGATGGTCGAACCCTTTCTGACTACAATA 21151 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||||||||||| || |||||| || | || ||| Sbjct 21152 TCCAAAAAGAATCAACACTTCACCTTGTTCTGCGGCTTAGA 21192 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| ||||| | || || ||||| || || | || || ||| | ||| Sbjct 19378 CAAATCTTCGTTAAAACATTAACTGGTAAAACCATTACGTTAGAAGTAGAACCCAGTGAC 19437 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||| ||||| || || |||||||| ||||| || ||||| Sbjct 19438 ACGATAGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGAATTCCTCCCGATCAGCAG 19497 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || ||||| || |||||||| | ||||| | || ||||| | Sbjct 19498 AGGTTAATCTTTGCAGGTAAACAACTTGAAGATGGTCGCACTCTATCAGACTATAATATT 19557 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||||||||| || || |||||||| Sbjct 19558 CAAAAAGAATCTACCCTTCATCTTGT 19583 Score = 96.9 bits (106), Expect = 8e-15 Identities = 148/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| || || || ||||| || || || || || || | || || ||| ||| Sbjct 20062 CAAATCTTTGTAAAGACTCTTACTGGTAAGACAATAACATTAGAAGTTGAACCTAGC--- 20118 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||| || ||||| || || ||||| || |||||||||||||| || || || Sbjct 20119 GACACCATTGAAAACGTAAAGGCTAAAATTCAAGATAAAGAAGGAATCCCACCTGATCAA 20178 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | || || || || || || || |||||||| | ||||| | || || ||| Sbjct 20179 CAGAGATTGATATTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTGTCTGACTACAAC 20238 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTT 178130 | ||||| ||||| || || || || ||| Sbjct 20239 ATTCAAAAGGAATCTACTCTTCACCTAGTT 20268 Score = 91.5 bits (100), Expect = 4e-13 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || ||||| ||||| || | || || ||||| || ||| | || || || || || Sbjct 19834 CAGATTTTTGTGAAGACATTAACTGGGAAAACTATTACCTTAGAAGTAGA--GCCTAGTG 19891 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 | || || || || || ||| || ||||| |||||||||||||| || || || || | Sbjct 19892 ATACAATTGAAAATGTTAAAGCTAAAATTCAAGACAAAGAAGGAATTCCACCAGATCAAC 19951 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | || || || || || ||||| |||||||| | || | | || || ||| Sbjct 19952 AGAGGTTAATTTTTGCTGGTAAGCAGCTTGAAGATGGTCGTACATTATCTGACTACAACA 20011 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | || |||||||| || ||||||| || ||| |||| ||| Sbjct 20012 TTCAGAAAGAATCTACTTTGCATCTCGTCTTGCGACTGAGA 20052 Score = 86.0 bits (94), Expect = 2e-11 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || || || || || || || ||| ||||| |||||||| || || || || || ||| Sbjct 21372 GATACTATAGAAAATGTGAAGGCAAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAG 21431 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || | ||||| || || || ||||| || || ||||| || || | | ||||| || Sbjct 21432 CAGAGGCTTATTTTTGCTGGTAAACAACTAGAGGATGGTAGAACATTATCAGATTACAAT 21491 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | ||||||||||| || || ||||| || | ||||| ||| Sbjct 21492 ATACAAAAAGAATCTACTCTTCATCTGGTGCTTAGACTTAGA 21533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201389802129916