Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2770 98.7 9e-16 >seq2770 Length=41231 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| ||||| || || || |||||||||||||| || || || ||| | || Sbjct 19814 AAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAAAGCGTACGCCCATCT 19755 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || ||||| || || || || || || || || || || | || | || || ||| | Sbjct 19754 TCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGTATGC-CTTCTTTATC 19696 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| ||||||||| || | | ||||| || ||||| ||||| | ||||| || Sbjct 19695 TTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAACCTCTAATGTTATTGT 19636 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || |||||||| || |||||||| Sbjct 19635 TTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| |||||||| ||| ||||| ||||| |||||||| || | || | | || || Sbjct 20952 CACAAGATGCAGAGTGGATTCCTTTTGAATATTATAGTCTGATAATGTTCTGCCATCTTC 20893 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||| || || || || || || ||||| || || | |||| || || || || | Sbjct 20892 AAGCTGTTTTCCTGCAAAAATAAGTCGCTGCTGATCAGGAGGAATGCCTTCTTTATCT-T 20834 Query 41773 GATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || |||| || | || || ||| || || | ||| ||||| | ||||| |||| Sbjct 20833 GAATTTTAGCCTTTACATTTTCAATAGTATCACTGGGCTCAACCTCTAGAGTTATTGTTT 20774 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| |||| ||||||||||| || ||||| Sbjct 20773 TACCAGTCAAGGTCTTTACGAATATTTGCAT 20743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461426697256800