Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq20317 86.0 5e-12 >seq20317 Length=5186 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| || || | || | ||| | ||||| |||||||| ||||| ||||| | Sbjct 443 TTCCTCCTCTCAATCTTAATACTAAATGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTG 502 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || | | || |||| ||| || || ||| | || ||||||||||| || || Sbjct 503 ACAAAGTACGTCCATCTTCCAACTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCTGGGG 562 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||| || ||||| || || | | | ||||| ||| || Sbjct 563 GAATTCCTTCCTTATCTTGAATCTTGGCCTTAACGTTTTCAATGGTATCTGAGGGTTCAA 622 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||||||||||| || || || ||||||||||| || |||||| Sbjct 623 CCTCGAGCGTAATGGTCTTTCCAGTCAAAGTTTTGACAAAGATCTGCATT 672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421831209291140