Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq9530 214 3e-50 seq46208 208 1e-48 seq66674 156 6e-33 seq42503 134 2e-26 seq20317 132 7e-26 seq12343 107 3e-18 seq17180 86.0 9e-12 >seq9530 Length=29750 Score = 214 bits (236), Expect = 3e-50 Identities = 452/670 (67%), Gaps = 18/670 (3%) Strand=Plus/Minus Query 202724 TTGTTATTTTTATAATATTTTTTAATAAATAAATCAACATCAAATTTACGTCTACATCCT 202783 ||||| || || |||| | |||||| | | ||| | |||||||||| | ||||| Sbjct 22544 TTGTTCTTAGGATTATATCTGTTAATATAGGAGCCAATGTTAAATTTACGTTTGCATCCA 22485 Query 202784 TCATAACTCATATATCTAATTTTACCAAATATTGGTCTTTCTTTCCATGCTCTATCATGA 202843 ||||| ||||||||| ||||||||||||||| | |||||| |||| || |||||| Sbjct 22484 TCATAGTTCATATATCGAATTTTACCAAATATGGATCTTTCACGCCATCCTTGATCATGG 22425 Query 202844 ATACCACAAATTGACCACATACATCCAACATATCCATTTGGATCACGTCCATCTATAAAA 202903 || ||||| || |||||||| || || ||| ||||||| | |||| |||||| | | Sbjct 22424 ATTCCACATATCGACCACATGCACCCTACAAATCCATTAGCATCATTTCCATCCAATGCA 22365 Query 202904 TATTTATCATTTAAATNNNNNNNNNNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCT 202963 || | |||||| | || | ||| | || || || ||||| ||| Sbjct 22364 TAGTGATCATTAAGATATAGAGCGTCAGCCAGCGCTACATCGGGACTTTCCGTCCACTCT 22305 Query 202964 AATAtttttttAGCCCAATACATTCTTAAATATCCATGCATTTTACCATAGATAATCATT 203023 ||||| |||||||||||||||||||| | || ||||| | || || | | | | | Sbjct 22304 AATATCTTTTTAGCCCAATACATTCTCATGTACCCATGTAACTTTCCTTCAGTGACAAGT 22245 Query 203024 TGTTTTTGTGATGCATTCCATAAATTGTCATGAGTTAATGCATTTTC-AAGTT-GATATA 203081 || || |||| ||||||||||| | |||||| ||| || ||||| || || ||| | Sbjct 22244 TGGTTCTGTGCTGCATTCCATAGGTCGTCATGTGTTTTCGCCTTTTCTAACTTGGATCTT 22185 Query 203082 AACTATATATATGTTTTCTAGTATCATTTTTATGTTCATTTAGTGTTTTTATTGCCCAAT 203141 | || || || | || | || |||||||| ||| | || || || ||||||| Sbjct 22184 GA--GTAAATGTGGGTCCTTTTGTCTTTTTTATGCTCACTGAGAGTCTTCTGAGCCCAAT 22127 Query 203142 TATTAGCACCATTTATATTATCGTAATTTTCATTATAATAACAAAAATTATCACATAGTT 203201 ||||| || | | |||| || || ||||| ||||| ||||||||||| | || | Sbjct 22126 CTGCGGCACCCTTCACACTATCATAGTTCTCATTGTAATAGCAAAAATTATCTGACAGCT 22067 Query 203202 CTTTACGAATAATAGCTTCTT-CACAAA-AAACTTCTACCGATTTAGGATATAATTTTTT 203259 || | || | ||| | |||| |||||| |||| ||| || | |||| | Sbjct 22066 CTCTTCGTACAATGGACTCTTCCACAAAGGAACTACTA------TA----CTTATTTGCT 22017 Query 203260 ATATTTGTTAATTTCTAATATTATTCTTTGAGTTGAAATTTGACCAAAATGTATCCATGG 203319 | ||| || | | ||| | | |||||| ||||| || ||| || | ||| || Sbjct 22016 A-CTTTTTTTACGTATAAAACTGCTCTTTGCACAGAAATCTGGCCATTGTGGAACCAAGG 21958 Query 203320 TGATAAATTACTTATTGCATTAGCATTTGGATCATTTCtttttttAGCATAATCTTTTAA 203379 || ||| || ||| ||||||||||||||||||| | || || | |||| || Sbjct 21957 GGACAAACGTGATAAAACATCTTCATTTGGATCATTTCTTTTGTCAGTAT-ACCTTTGAA 21899 Query 203380 TCTATTTTGT 203389 || ||| || Sbjct 21898 TCCTTTTAGT 21889 >seq46208 Length=8390 Score = 208 bits (230), Expect = 1e-48 Identities = 410/603 (68%), Gaps = 9/603 (1%) Strand=Plus/Plus Query 205359 TAATTGtttttttAATCCATTAATATGATTAACATATATATGTGCATTACCAATATTATG 205418 |||||||| || ||| ||| ||| ||||| |||| ||||||| ||| | |||| Sbjct 5514 TAATTGTTCTTCTAAGGCATCAATGTGATTGTTGTATACGTGTGCATCACCTAAGGTATG 5573 Query 205419 AATAAATTCATATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATA 205478 ||| |||||| ||||| | ||| || | ||| || | |||| || || | | ||| Sbjct 5574 AATGAATTCACCAGGTTTGAGATTGGTCACATGGGCCAACATAATCGTTAAGAGAGAATA 5633 Query 205479 ACTAGCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACA 205538 ||| || | ||||| ||||| ||||| |||||||| || |||| |||||| | |||||| Sbjct 5634 ACTTGCTATGTTAAAAGGTACTCCTAATCCCATATCTGCAGATCGTTGATATAATTGACA 5693 Query 205539 TGTAAGATATTT-ATTATTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAA 205597 ||||| || | ||| |||| |||||| | ||||| |||||||| || | | Sbjct 5694 ----AGATAGTTCACCATTGGCAACATAAAATTGAGCCAAACAGTGACAAGGGGGAAGAG 5749 Query 205598 CCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtt 205657 |||| || |||| ||||||||||||| | || |||| | | | || | Sbjct 5750 CCATCAGGGGAATATCTTTAGGATTCCAGGCGCACATTAATATACGACGATCGTTTGGGT 5809 Query 205658 tattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTG 205717 ||| |||||| | || |||| ||| | | || |||| ||||| | || | | Sbjct 5810 TATCTTTTATAGTCTTGATAACATGAGAAAGCTGGTCAACTCCTTTCCCTTGGTAGTCAG 5869 Query 205718 TATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTA 205777 | | ||||| | | |||| || ||| ||||||||||||| || ||||| |||||||| | Sbjct 5870 TGTGCATATTATTGTATTCCGCTCCATAATGACGCCATTGGAATCCATATACTGGACCGA 5929 Query 205778 AATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatgatccatttt 205837 ||| || |||| ||| | |||| || | || | ||| ||| ||| Sbjct 5930 GATCTCCCTCTTCTCTGTTGGTAAATCCCATAGAATCTAAAAATTCCCTTGAGGAGTTTC 5989 Query 205838 catcccaaatatggattcctttattt--tttaGAATATTTGTATTAGTTGATCCAGATAT 205895 |||||| |||| ||||| ||| || || ||||| ||| |||||||| || Sbjct 5990 CATCCC--ATATCCTCACCTTTTTTTCCTTAAGCTCATTTGCATTTGTTGATCCTCGAAT 6047 Query 205896 AAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGG 205955 |||||| ||||||||||| | |||||||| ||| | | ||| || || | |||||| Sbjct 6048 AAACCAAAATAATTCTTCTGCGATTCCTCTTATAAAAACAGTTTTGGTAGTTAGTAATGG 6107 Query 205956 AAA 205958 ||| Sbjct 6108 AAA 6110 >seq66674 Length=28361 Score = 156 bits (172), Expect = 6e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | || ||||| || || ||||| || ||| | || ||||||| Sbjct 27648 AATGCAGATTTTCGTTAAAACACTCACTGGTAAAACAATCACTCTTGAAGTTGAAGCTTC 27589 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| || ||| | || ||||||||||| ||||||||||| || || ||||| Sbjct 27588 TGATACTATAGAAAATGTTAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCA 27529 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || ||||| || ||||||||||||||| | || || ||| ||| ||||| Sbjct 27528 GCAACGTTTGATCTTTGCTGGTAAACAATTAGAGGATGGACGTACTTTATCAGACTATAA 27469 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||| || || |||||||| |||||| | | |||||||||| Sbjct 27468 CATTCAAAAAGAGTCCACGTTGCATTTAGTTTTAAGACTTAGAGGTGGTAT 27418 Score = 147 bits (162), Expect = 3e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | || || || || || ||||| || ||| | || | ||||| Sbjct 27876 AATGCAAATCTTTGTCAAAACCCTTACTGGTAAAACAATCACTCTTGAAGTCGAAGCTTC 27817 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | ||| ||||||||||| || |||||||| || || ||||| Sbjct 27816 TGATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCCCCAGATCA 27757 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | || ||||| || |||||||| || ||| | |||| | ||||||||| Sbjct 27756 ACAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACGCTTTCAGATTATAA 27697 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| ||||| ||| | ||||| |||||| | || ||||||| || Sbjct 27696 CATTCAAAAGGAATCTACTCTTCATTTAGTTTTAAGATTGAGAGGTGGAAT 27646 Score = 138 bits (152), Expect = 2e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | ||||| |||| || ||||| || ||| | || | ||||| Sbjct 28104 AATGCAAATCTTTGTTAAGACCTTAACCGGTAAAACAATCACTCTTGAAGTCGAAGCTTC 28045 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | ||| || || |||||||| |||||||| || || ||||| Sbjct 28044 AGACACAATTGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCA 27985 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | || ||||| || |||||||| || ||| | |||| | ||||||||| Sbjct 27984 ACAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCCTTTCAGATTATAA 27925 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||| ||||| ||| | ||||| || || | || ||||||| || Sbjct 27924 TATTCAAAAGGAATCCACTCTTCATTTAGTATTGAGATTGAGAGGTGGAAT 27874 Score = 123 bits (136), Expect = 4e-23 Identities = 169/235 (72%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || ||||| || || ||||| || ||| | || |||| | | Sbjct 27419 ATGCAGATTTTCGTTAAAACACTCACTGGTAAAACAATCACTCTTGAAGTTGAGCCCTCT 27360 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| ||||||||||| || || || || || || ||||| Sbjct 27359 GATACCATTGAGAATGTTAAAGCCAAAATTCAAGACAAGGAGGGCATTCCTCCAGATCAG 27300 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| || |||||||| || ||| | || || ||| |||||||| Sbjct 27299 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGCACTTTATCCGATTATAAC 27240 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG-TATTAAA 124772 |||||||||||||| || | || |||||||| || | || ||||| |||||| Sbjct 27239 ATTCAAAAAGAATCTACCCTTCACTTGGTTTTGCGCCTTCGTGGTGGAAATTAAA 27185 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | || || || || || ||||| || || | || | ||||| Sbjct 28332 AATGCAGATTTTTGTTAAAACTCTGACTGGAAAAACCATCACACTTGAAGTGGAAGCTTC 28273 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | || |||||||||||||| |||||||| || || || || Sbjct 28272 AGACACAATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGACCA 28213 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | || ||||| || ||||||||||||||| | ||||| | ||||||||| Sbjct 28212 ACAACGTTTGATCTTTGCTGGTAAACAATTAGAGGATGGAAGAACACTTTCAGATTATAA 28153 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | || |||| | | ||| |||| || || Sbjct 28152 CATCCAAAAGGAGTCCACCCTTCACCTGGTCCTCAGATTAAGAGGAGGAAT 28102 >seq42503 Length=950 Score = 134 bits (148), Expect = 2e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | ||||| |||| || ||||| || ||| | || | ||||| Sbjct 867 AATGCAAATCTTTGTTAAGACCTTAACCGGTAAAACAATCACTCTTGAAGTCGAAGCTTC 808 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | ||| || || |||||||| |||||||| || || ||||| Sbjct 807 AGACACAATTGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCA 748 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | || ||||| || |||||||| || ||| | |||| | ||||||||| Sbjct 747 ACAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACNCTTTCAGATTATAA 688 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||| ||||| ||| | ||||| || || | || |||| || || Sbjct 687 TATTCAAAAGGAATCCACTCTTCATTTAGTATTGAGATTGAGAGGAGGAAT 637 Score = 132 bits (146), Expect = 7e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | ||||| |||| || |||||||| ||| | || | ||||| Sbjct 411 AATGCAAATTTTTGTCAAGACCTTAACTGGTAAAACTATCACTCTTGAAGTCGAAGCTTC 352 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | || |||||||||||||| |||||||| || || || || Sbjct 351 TGATACTATTGAGAATGTTAAGGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGACCA 292 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | || ||||| || ||||||||||||||| | ||||| | ||||||||| Sbjct 291 ACAACGTTTGATCTTTGCTGGTAAACAATTAGAGGATGGAAGAACACTTTCAGATTATAA 232 Query 124718 TATTCAAAAAGAATCAAC 124735 || ||||| || || || Sbjct 231 CATCCAAAAGGAGTCCAC 214 Score = 109 bits (120), Expect = 8e-19 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| |||| || |||||||| ||| | || | ||||| | Sbjct 182 ATGCARATTTTTGTCAAGACCTTAACTGGTAAAACTATCACTCTTGAAGTCGAAGCTTCT 123 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || ||||| |||||||| ||||| || || || ||||| Sbjct 122 GATACTATTGAGAATGTCAAGGCTAAAATCCAAGATAAGGAAGGAATTCCTCCAGATCAG 63 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | |||||||| || ||||||||||| ||| | || || ||| ||| ||||| Sbjct 62 CAGAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTTTATCAGACTATAAC 3 Query 124719 AT 124720 || Sbjct 2 AT 1 Score = 93.3 bits (102), Expect = 6e-14 Identities = 164/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | || || || || || ||||| || || | || ||||||| Sbjct 639 AATGCAGATTTTCGTTAAAACCCTCACTGGAAAAACCATCACACTTGAAGTTGAAGCCTC 580 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | || |||||||||||||| ||||| || || || ||||| Sbjct 579 AGACACCATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAAGGAATTCCTCCAGATCA 520 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||| | || ||||| || || |||||||| ||| | |||| | ||||| || Sbjct 519 GCAAAGATTGATATTTGCTGGCAAGCAATTAGAAGATGGAAGAACTCTTTCCGATTACAA 460 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||| || || || ||||| | || |||||| | | || |||| || || ||| || Sbjct 459 TATCCAGAAGGAGTCAACCCTTCACTTGGTTCTCAGATTGAGAGGAGGAATGCAAATTT 401 >seq20317 Length=5186 Score = 132 bits (146), Expect = 7e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| | ||||| |||| || ||||| || ||| | || | ||||| Sbjct 216 AATGCAAATCTTTGTTAAGACCTTAACCGGTAAAACAATCACTCTTGAAGTCGAAGCTTC 157 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | ||| || || |||||||| |||||||| || || ||||| Sbjct 156 AGACACAATTGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCA 97 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | || ||||| || |||||||| || ||| | |||| | ||||||||| Sbjct 96 ACAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACTCTTTCAGATTATAA 37 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 ||||||||| ||||| ||| | ||||| || || Sbjct 36 TATTCAAAAGGAATCCACTCTTCATTTAGTATT 4 Score = 113 bits (124), Expect = 7e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | || || || || || ||||| || ||| | || | ||||| Sbjct 444 AATGCAGATTTTTGTTAAAACTCTCACTGGAAAAACAATCACTCTTGAAGTGGAAGCTTC 385 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | || ||||| |||||||| ||||| || || || ||||| Sbjct 384 AGACACTATTGAAAATGTCAAGGCTAAAATCCAAGATAAGGAAGGAATTCCTCCAGATCA 325 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || | |||||||| || ||||||||||| ||| | || || ||| ||| ||||| Sbjct 324 GCAGAGATTGATTTTTGCTGGYAAACAATTAGAAGATGGACGTACTTTATCAGACTATAA 265 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGT 124747 |||||||| || || || | |||||||| Sbjct 264 CATTCAAAAGGAGTCGACCCTTCATTTGGT 235 Score = 87.8 bits (96), Expect = 3e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | || || | || || || || || || | ||| ||||| | Sbjct 672 AATGCAGATCTTTGTCAAAACTTTGACTGGAAAGACCATTACGCTCGAGGTTGAACCCTC 613 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| || | || || ||||||||||| ||||| || || || ||||| Sbjct 612 AGATACCATTGAAAACGTTAAGGCCAAGATTCAAGATAAGGAAGGAATTCCCCCAGATCA 553 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || || || ||||| ||||| || || || ||| | || || || ||| || || Sbjct 552 GCAGAGACTGATCTTTGCTGGAAAGCAGTTGGAAGATGGACGTACTTTGTCAGACTACAA 493 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||| || | ||||| || ||| | || |||| || || Sbjct 492 CATCCAAAAGGAATCCACCCTTCATTTAGTATTAAGATTGAGAGGAGGAAT 442 >seq12343 Length=6788 Score = 107 bits (118), Expect = 3e-18 Identities = 169/239 (71%), Gaps = 11/239 (5%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || ||||||| || | || |||||||| || | ||| |||| || || Sbjct 2377 ATGCAGATTTTCGTAAAGACCCTTGCGGGTAAAACTATTACCCTTGAGGTTGAGGCCTAT 2318 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCT---GAT 124655 | ||| | ||||||| ||||| | ||||| || || ||||| ||| ||| Sbjct 2317 CGAA-AATGT------TAAAACA-AAAATCAAGGATAAGGAGGGAATACCTCCTCTAGAT 2266 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || ||| | | || |||| |||||||||||||||||| |||| || | || || Sbjct 2265 CAGCAACGTTTGATCTTTGTTGGAAAACAATTAGAGGATGGTCGTACTCTTTTGGACTAC 2206 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 || ||| |||||||||| ||| | ||||||||| | || | ||||||||| ||||| Sbjct 2205 AACATTAAAAAAGAATCCACTCTTCATTTGGTTCTCTGTCTCCGAGGTGGTGGAAAAAA 2147 >seq17180 Length=12851 Score = 86.0 bits (94), Expect = 9e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || || |||||||| || | ||| |||| || Sbjct 3932 ATGCAGATTTTCGTGAAGACCCTCACGGGTAAAACTATTACCCTTGAGGTTGAGGCCTCA 3991 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| |||| || ||||| || ||||| || || || || || ||||| Sbjct 3992 GATACTATCGAAAATGTTAAGACC-AAAATCCAGGATAAGGAGGGAATTCCTCCAGATCA 4050 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || ||||| ||||| |||||||||||| | || || | || || || Sbjct 4051 GCAACGTTTGATCTTTGCGGGAAAGCAATTAGAGGATGGCCGTACCCTTTCGGACTACAA 4110 Query 124718 TATTCAAAAAG 124728 |||||||||| Sbjct 4111 CATTCAAAAAG 4121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754670656272000