Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq46208 107 3e-18 >seq46208 Length=8390 Score = 107 bits (118), Expect = 3e-18 Identities = 140/194 (72%), Gaps = 15/194 (8%) Strand=Plus/Minus Query 104551 GCTTGGAACCCAAAGGATAATTCTAAAATGGCACTTCCTCCTTGTCATTGTATAGCACAT 104610 || ||||| || || |||| | | ||||| ||||| |||||||| ||| | || || Sbjct 5780 GCCTGGAATCCTAAAGATATTCCCCTGATGGCTCTTCCCCCTTGTCACTGTTTGGCTCAA 5721 Query 104611 TTTGATGTAAGTTCAAAAATAAATGGTAAAAGAGAATTGTCTTGTCATTTATTTCAAAGA 104670 ||| |||| | | || |||| ||| | |||||||| |||| |||| || Sbjct 5720 TTTTATGT---TGCCAA------TGGT------GAACTATCTTGTCAATTATATCAACGA 5676 Query 104671 TCTGCAGATATGGGGTTGGGAGTTCCTTTTAACATAGCAAGTTATGCATTATTAACACAT 104730 |||||||||||||| || ||||| ||||||||||||||||||||| | | ||||| | Sbjct 5675 TCTGCAGATATGGGATTAGGAGTACCTTTTAACATAGCAAGTTATTCTCTCTTAACGATT 5616 Query 104731 ATAATAGCTCATGT 104744 || | || ||||| Sbjct 5615 ATGTTGGCCCATGT 5602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679107690442800