Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq27661 188 6e-43 seq58440 181 9e-41 seq20317 113 4e-20 seq66674 111 1e-19 seq62093 109 5e-19 >seq27661 Length=34041 Score = 188 bits (208), Expect = 6e-43 Identities = 260/359 (72%), Gaps = 11/359 (3%) Strand=Plus/Plus Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566 || || || ||| | | ||||||||| |||||| || || |||| || |||||| Sbjct 21450 GACGAGCCTCTTCTACGAGAGAATCCTAATAGATTCGTAATCCTTCCTATCGAATATTTT 21509 Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 || |||||||||||||| || ||||| | |||| |||||||| || || ||||| ||| Sbjct 21510 GATATTTGGAACATGTATAAGAAGGCCGTAGCAAGCTTTTGGACTGTGGAGGAAGTGGAC 21569 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAA--GAATC-TGAGAGAA----ATTT 57679 || ||||| ||| ||| ||||| ||| |||| |||| ||| | || Sbjct 21570 CTCAGCAAGGACTTGATCGACTGGGAGGAG---AAATTGAATGATGAG-GAACGGTACTT 21625 Query 57680 TATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGT 57739 ||| || || ||||| |||||||| || || || || ||||| |||||||| | || Sbjct 21626 TATATCACGAGTTTTGGCATTTTTCGCTGCGTCGGACGGAATTGTGAACGAGAACATTGT 21685 Query 57740 CGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGT 57799 || |||||| |||| ||||| || || |||||||||||||| || ||||| |||||| | Sbjct 21686 GGAGAGATTTACACAGGAAGTACAGGTTACGGAGGCGAGATGTTTCTACGGGTTTCAAAT 21745 Query 57800 GGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGG 57858 || || || ||| | || || |||||||| || |||| || || || ||| | |||| Sbjct 21746 TGCAATCGAGAACATTCACTCCGAAATGTACTCATTACTTATAGACACTTACATAAAGG 21804 Score = 167 bits (184), Expect = 2e-36 Identities = 299/437 (68%), Gaps = 0/437 (0%) Strand=Plus/Plus Query 57978 ATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGG 58037 || || || || |||||||| || || |||||||| || ||||| | ||||| ||| Sbjct 21995 ATTGCCTTTGCTGCCGTCGAGGGCATCTTCTTTTCAGGGTCATTTGCTTCCATATTCTGG 22054 Query 58038 ATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGAC 58097 | |||||||| || || |||||||| || || ||| ||||| | ||||| | ||| Sbjct 22055 TTAAAGAAACGTGGACTCATGCCCGGTCTCACCTTTTCAAACGAACTTATATCTAGAGAC 22114 Query 58098 GAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACG 58157 ||||| | ||||| |||||||| || || |||| ||| ||| |||| || | Sbjct 22115 GAGGGATTGCATACAGATTTTGCCTGTCTTATGTTTAGACACCTTGCTCATAAGCCATCC 22174 Query 58158 CGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACC 58217 || ||| || | || ||||| ||||| || ||||| |||| ||| ||| | || Sbjct 22175 GTGGCTCGTATTGTCGAAATTATTCGTGAGGCTGTTGCGATTGAAAGTGAATTTCTAACT 22234 Query 58218 GAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAG 58277 || || || || || ||| | || |||||| ||||| ||| | || ||| | Sbjct 22235 GAGGCACTCCCCGTTCGAATGTTGGGAATGAACTGTGATTCCATGGTGCAATATATTAAA 22294 Query 58278 TTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTACAACACGAAAAAT 58337 |||||||| || |||||| | | || || | | | | |||| || | ||| Sbjct 22295 TTTGTTGCAGATAGACTTCTTGTAGAGCTTAATTGTCCGAAAATTTACCTAACTGAGAAT 22354 Query 58338 CCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaa 58397 || |||||||||||| | || || || || || || || || ||||| |||||||| Sbjct 22355 CCCTTTGATTTTATGGAAAATATTTCACTTGATGGTAAAACCAATTTTTTTGAAAAAAAG 22414 Query 58398 GTTAGCGAATATCAAAA 58414 ||| | ||||||||||| Sbjct 22415 GTTGGGGAATATCAAAA 22431 >seq58440 Length=15377 Score = 181 bits (200), Expect = 9e-41 Identities = 532/817 (65%), Gaps = 2/817 (0%) Strand=Plus/Minus Query 23066 TACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTG 23125 || ||||| ||||||||||||| ||| || ||||| || ||||| || | || || Sbjct 5279 TATTCTACTATTTCGGTACATAAATTAGAGCATTTTATAGTTCCCAAGTTCTTTTGATTA 5220 Query 23126 CTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGAC 23185 ||| |||||||| || |||||||| | |||||| || || || || || | ||||| Sbjct 5219 GATTTCCGATTGCAAGAGTCCTTGTATAACATGTAGGGAGTCCCAGTTTCAATTTGCGAT 5160 Query 23186 TCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTGCCTTCTTCC 23245 || ||||| || ||||| | ||||| | || | ||| | | || ||| ||| Sbjct 5159 TCAATGATGGCCTCCCACACTTTATGAGCAGGTACCTGCCGCCTGAATTTGTTTTCATCC 5100 Query 23246 TCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGAT 23305 || || || | || | ||||| || |||| || || | | || || || Sbjct 5099 TCATATTTAAGATATAGTTTCTCAAAATCTTCACCCCAAACATCATCTAACCCTGGACAT 5040 Query 23306 TGCAT-CGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATC 23364 | ||| |||||||| || ||||| || || | ||| || ||| |||| || | ||| Sbjct 5039 T-CATGAGGACACATAAGGCTCCAAATACCATCCTCTTCCACTCGTTTCATGAATAAATC 4981 Query 23365 CGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTT 23424 || ||||| ||||| ||||| | || | || | ||| || || || || || Sbjct 4980 AGGAATCCAAAGAGCATAGAATAAATCCCTTGCCCTTTGCTCTTCAGCCCCCGTATTTTT 4921 Query 23425 TTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGC 23484 | || | ||| || || || ||||||||||| || || | |||| ||||| || Sbjct 4920 ACGTAGTTCTAGAAAATCAAAAACATCCGCATGCCAAGGTTCTAAATAAATTGCAAATGC 4861 Query 23485 GCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAG 23544 ||| || || || || || || || || || || ||||| || || | |||| || Sbjct 4860 GCCAGGCCTTTTGTTACCACCTTGGTCAACATATTTCGCCGTATTATTAAAAACTCGAAG 4801 Query 23545 CATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCG 23604 ||| || || | || || || || ||||| | | |||||||||||||| Sbjct 4800 CATGGGTACAATCCCATTAGAGTATCCATTGGTCCCCGCAATATAAGAACCTTTTGCTCG 4741 Query 23605 AACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTT 23664 || |||| | | ||| || ||||| | ||||| || || || || |||||| Sbjct 4740 AATACAATGAATATTAATACCGATCCCTCCAGCGGATTTTGAAATAATTGCAGTTTGTTT 4681 Query 23665 CAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGA 23724 |||||| || || ||||| || ||| ||| ||| | || || || || Sbjct 4680 CAGAGTATCATAAATGCCTTCAATGGAGTCAGAGGACATCGTTAATAAAAAGCAGCTTGA 4621 Query 23725 CATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCC 23784 | ||| | ||| || ||||| || ||| ||||| || ||| || || || || || Sbjct 4620 TAATTGAGGTTTTGGTGTAGCAGCATTGAAAAGTGTGGGAGAGGCATGTGTGAAATACCC 4561 Query 23785 ATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGAT 23844 | || | || ||||| || | ||| | | ||||| || |||||||| ||||| | Sbjct 4560 TTGAGAGAGAAGGTTGTAGGTCTTGATCACACCTTCAATATCTTCTCCGTGAATACCTAC 4501 Query 23845 GGCGACGCGCATCATCATGTATTGAGGTCTCTCGACC 23881 | ||| | ||||| ||| | ||| || || || ||| Sbjct 4500 AGAGACTCTCATCAGCATATGTTGTGGCCTTTCAACC 4464 Score = 178 bits (196), Expect = 1e-39 Identities = 455/690 (66%), Gaps = 6/690 (1%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 ||||||||||| ||||| ||||| | || || | |||||| |||||||||||||| || Sbjct 6368 TTGTCCACTGTGAACTGAATGGCACTAGCCGCTGCTTTGGTACGAAGATAATACATCCCT 6309 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 || |||| || | ||||| |||| ||||| || || || | |||||| || | ||| Sbjct 6308 GTTTTCAATCCGAGTTTCCAACCGTAGAAATGCATGGATGTAAGTTTTCCGTAGTTAGGC 6249 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 | || | | || || || ||||| ||||| ||||| || || ||||| || ||| Sbjct 6248 TGTGCGATATGTATGTTCAAGGATTGACTTTGATCAATAAAAGCCCCGCGATCAGCAGCC 6189 Query 22286 ATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCT 22345 || | | | || || |||||||| || || || || || | | | || || Sbjct 6188 ATTTGAAGGACCGTCTTTTGAGAAATTTCCCAGACTGTTTTATAAAGCTTCTTAATATCG 6129 Query 22346 AACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATC 22405 || || || | || ||||| || ||| | | | || | ||||| || Sbjct 6128 TCAGGAATTTGAGGAATATTTTGTACGGATCCATTA-TCCGCA--ATAATATTTTGTTTC 6072 Query 22406 GTATCG---TTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACT 22462 | ||| | ||| | | | || | ||||| ||| | | | ||| | ||||| | | Sbjct 6071 ATTTCGTCATCCCAAAGATCCATATCAGTCAAGTCTCTCAATAAATGTTGATTCACAATT 6012 Query 22463 TGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522 ||||| || ||||| |||||||| | |||||| || |||||| | | || | | Sbjct 6011 TGAAATTCACCGGATAAGACGCGTCTGGAGTAAATATTTGATGTGTATGCCTCAATTCCT 5952 Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582 |||||||| || ||||| || || || || ||||| ||||| || || | || || || Sbjct 5951 TCATTGTTACCTAGTATTTGGGCCGTGGAGGCGGTTGGCATGGGAGCAAGAAGAAGGGAA 5892 Query 22583 TTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGAC 22642 || | | |||| || | |||||| ||| | | ||||| ||||||| || | Sbjct 5891 TTCCGTACTCCGTCTTTAGCAATTTTTGCCTTTAATTTTGACCAATCCCACATATTTGTG 5832 Query 22643 GGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCG 22702 || || ||| ||||| | ||| |||| | || || |||| | || |||| Sbjct 5831 GGGGTAACACCTTCCCAAAGATCAAATTGTAGCAACCCTTGACTTACTGGAGATCCTTTA 5772 Query 22703 TACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAA 22762 || || ||||| | || || || || ||||| || ||||| || || || ||||| Sbjct 5771 TATGTCTCGTATGTTCCCAATTCAGCAGCTAGTTCACAACTCGCTTCTAAGGCACCGTAG 5712 Query 22763 TATATAGTCTCGAAGATTTTCTTGTTCAAT 22792 || ||||| || || |||| ||||| ||| Sbjct 5711 TAAATAGTTTCAAATATTTGTTTGTTTAAT 5682 >seq20317 Length=5186 Score = 113 bits (124), Expect = 4e-20 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || || ||||| || || ||||| ||||| | || || ||| | || Sbjct 443 ATGCAGATTTTTGTTAAAACTCTCACTGGAAAAACAATCACTCTTGAAGTGGAAGCTTCA 384 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| ||||| | ||| || |||||||| | || || || ||| Sbjct 383 GACACTATTGAAAATGTCAAGGCTAAAATCCAAGATAAGGAAGGAATTCCTCCAGATCAG 324 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||| | | || || ||||| ||||| || ||||| | | | ||| | || ||||| Sbjct 323 CAGAGATTGATTTTTGCTGGYAAACAATTAGAAGA-TGGACGTACTTTATCAGACTATAA 265 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||||||| || ||||| |||||| |||| |||||| |||| || || Sbjct 264 CATTCAAAAGGAGTCGACCCTTCATTTGGTCCTTAGATTGAGAGGAGG 217 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || ||||| || || ||||| ||||| | || || ||| | || Sbjct 899 ATGCAAATCTTTGTGAAAACTCTCACGGGTAAAACCATCACACTTGAAGTGGAAGCTTCA 840 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| ||||| || ||| | ||| |||||||| | || || || || Sbjct 839 GACACGATTGAAAATGTCAAGACCAAGA-TCCAGGATAAGGAAGGAATCCCCCCAGATCA 781 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||| ||| | || || ||||| || || ||||| || | | | || || ||| || | Sbjct 780 GCAACGTTTGATCTTTGCTGGAAAGCAATTGGAGGA-TGGACGTACATTGTCCGACTACA 722 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||||| ||||| ||||| || | || || || |||| || || Sbjct 721 ACATTCAAAAGGAATCCACTCTCCACTTAGTCCTGAGGTTGAGAGGAGG 673 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || ||| |||| || || || || || |||| |||||||| || Sbjct 671 ATGCAGATCTTTGTCAAAACTTTGACTGGAAAGACCATTACGCTCGAGGTTGAACCCTCA 612 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || || | || || |||||||| | || || || ||| Sbjct 611 GATACCATTGAAAACGTTAAGGCCAAGATTCAAGATAAGGAAGGAATTCCCCCAGATCAG 552 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||| | || || || ||||| || ||||||||||| | | | ||| || || || || Sbjct 551 CAGAGACTGATCTTTGCTGGAAAGCAGTTGGAAGA-TGGACGTACTTTGTCAGACTACAA 493 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| ||||| ||||| || |||||| | ||| | ||| |||| || || Sbjct 492 CATCCAAAAGGAATCCACCCTTCATTTAGTATTAAGATTGAGAGGAGG 445 >seq66674 Length=28361 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| || || || || || ||||| ||||| | || ||||| || || Sbjct 27419 ATGCAGATTTTCGTTAAAACACTCACTGGTAAAACAATCACTCTTGAAGTTGAGCCCTCT 27360 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || ||| | ||| |||||||| ||| | || || || ||| Sbjct 27359 GATACCATTGAGAATGTTAAAGCCAAAATTCAAGACAAGGAGGGCATTCCTCCAGATCAG 27300 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||| | || || ||||| ||||| |||||||| | | | ||| | ||||||||| Sbjct 27299 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGA-TGGACGCACTTTATCCGATTATAA 27241 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||||||||||||| || ||||| |||| Sbjct 27240 CATTCAAAAAGAATCTACCCTTCACTTGGT 27211 Score = 109 bits (120), Expect = 5e-19 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || || || || || ||||| ||||| | || || ||| | || Sbjct 27875 ATGCAAATCTTTGTCAAAACCCTTACTGGTAAAACAATCACTCTTGAAGTCGAAGCTTCT 27816 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| || ||| | ||| ||||||||||| | || || || || Sbjct 27815 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCCCCAGATCAA 27756 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGA---CTATGAGCGATTAT 31369 || ||| |||| || ||||| ||||| |||||||| | | || || | | |||||| Sbjct 27755 CAACGTTTAATCTTTGCTGGTAAACAATTGGAAGA-TGGAAGAACGCTTTCA--GATTAT 27699 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||||||||| ||||| ||||||||| | || | ||| |||| || || Sbjct 27698 AACATTCAAAAGGAATCTACTCTTCATTTAGTTTTAAGATTGAGAGGTGG 27649 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || || |||||||| || ||||| ||||| | || || ||| | || Sbjct 28331 ATGCAGATTTTTGTTAAAACTCTGACTGGAAAAACCATCACACTTGAAGTGGAAGCTTCA 28272 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| ||||| | ||| || |||||||| | || || ||||| Sbjct 28271 GACACAATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGACCAA 28212 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGA---CTATGAGCGATTAT 31369 || ||| | || || ||||| ||||| || || || | | || || | || ||||| Sbjct 28211 CAACGTTTGATCTTTGCTGGTAAACAATTAGAGGA-TGGAAGAACACTTTCAG--ATTAT 28155 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| ||||| || || || ||||| ||||| || ||| | || || || Sbjct 28154 AACATCCAAAAGGAGTCCACCCTTCACCTGGTCCTCAGATTAAGAGGAGG 28105 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| || || || || || ||||| ||||| | || |||||| | || Sbjct 27647 ATGCAGATTTTCGTTAAAACACTCACTGGTAAAACAATCACTCTTGAAGTTGAAGCTTCT 27588 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| || || | ||| ||||| ||||| | || || || ||| Sbjct 27587 GATACTATAGAAAATGTTAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAG 27528 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||| | || || ||||| ||||| || || || | | | ||| | || ||||| Sbjct 27527 CAACGTTTGATCTTTGCTGGTAAACAATTAGAGGA-TGGACGTACTTTATCAGACTATAA 27469 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||| || || | ||| | || | ||||| || || |||| Sbjct 27468 CATTCAAAAAGAGTCCACGTTGCATTTAGTTTTAAGACTTAGAGGTGGTA 27419 >seq62093 Length=56387 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244 |||| || |||||||| ||||| || ||| |||| ||||| || || ||| | || || | Sbjct 3725 AATCCAAGATGCAAATCTTCGTCAAAACTTTGACGGGCAAGACCATTACCCTTGAGGTCG 3666 Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303 |||| || || | |||||| || || || ||| | ||| |||||||| | || Sbjct 3665 AACCTTCAGATACCATCGAAAATGTGAAGACTAAGA-TCCAGGATAAGGAAGGAATTCCT 3607 Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC 31363 || || ||||| ||||| || || |||||||| ||| | ||||| | |||| || Sbjct 3606 CCAGATCAGCAACGTCTCATCTTTGCTGGCAAGCAGCTCGAAGATGGAAGGACTTTGTCT 3547 Query 31364 GATTATAACATTCAAAAAG 31382 |||||||||||||| |||| Sbjct 3546 GATTATAACATTCAGAAAG 3528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445302997966800