Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_004456.1 Length=43198 Score E Sequences producing significant alignments: (Bits) Value seq32720 89.7 1e-13 >seq32720 Length=1584 Score = 89.7 bits (98), Expect = 1e-13 Identities = 166/239 (69%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 30533 GTGATTGGTTTGGTGGGGACGGCACCGGATGCCGATGCCACCGCCTTTCCTCTGAATACG 30592 || ||||| ||| | |||||||| || | ||| ||| | |||||| || |||||| Sbjct 644 GTCATTGGGTTGATTGGGACGGCGCCAGGTGCGGATACGGATAACTTTCCACTCAATACG 585 Query 30593 CCGGTACTGATCGCCGGTAGCCGCCGAGAAGCGGCCAAGC--TGGGCGCAGGTGGTACAT 30650 || || |||| || || ||||| | ||||| ||| |||| | || |||| Sbjct 584 CCCGTTTTGATTGCGGGCCAGCGCCGTGCGGCGGC--AGCCTTGGGTGTGCAAGGCACAT 527 Query 30651 TGCCACAGGCAATTGATGGCATTTTTGACCAGACTGGCGCAGTGGTGGTGGTGATTCGCG 30710 |||| | ||||||||||||||||| || || || || |||| |||||| |||| | Sbjct 526 TGCCCGCGAGTATTGATGGCATTTTTGATCAAACGGGGGCCATGGTTGTGGTGGTTCGTG 467 Query 30711 TGGATGAGGGCGTGGATAGCG-CGGCCACTCAATCCAACGTGATCGGCAAAGTGGATGC 30768 | |||||||| | || ||| ||||||| ||||| || || || |||||||| Sbjct 466 TTGATGAGGGTGAAAAT-GCGTCGGCCACCATGTCCAATGTCATTGGTGGCGTGGATGC 409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137975602746800