Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq4037 131 9e-26 >seq4037 Length=9551 Score = 131 bits (144), Expect = 9e-26 Identities = 188/265 (71%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 3871 AAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATAT 3930 |||||| || ||||||||||||||||| ||||| || ||||| || |||||||| Sbjct 7988 AAAAGGAGTTCATTTTATGATGGCTGATGGTGGATTTGGTGTTGATGGAATGGAAAATAT 7929 Query 3931 GCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCAT 3990 || || || ||||| ||| | | ||| |||| || | | || |||| || | || | Sbjct 7928 TCAGGAGATTTTATCCAAACAACTTTATCTGTGCCAGTTTATAGTTGCTTTAAGCATTGT 7869 Query 3991 ACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGG 4050 || ||||| |||| |||| ||||| ||||||||||| || | ||||||| | Sbjct 7868 TCGTGAAGGTGGACATTTTGTTTGTAAATTATTCGATATATTCACTCACTTTAGTGTTAA 7809 Query 4051 TTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATC 4110 | | || ||||||||||| | ||| || | | | ||| | || |||||| | |||| Sbjct 7808 TCTGGTCTATTTGATGTACAAATCCTTCGAGCATGTTTCTCTTCATAAACCAAACACATC 7749 Query 4111 GCGACCGGCCAATTCTGAAAGATAT 4135 || || || ||||| || |||||| Sbjct 7748 TCGGCCCGCAAATTCAGAGAGATAT 7724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276273292616995