Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq36711 87.8 2e-12 >seq36711 Length=13912 Score = 87.8 bits (96), Expect = 2e-12 Identities = 199/297 (67%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAAT-ACTGAATCGCCTGGACT 6984 || || || ||||| || || ||| |||||||| ||||| | || || ||||| | Sbjct 9724 CCGTGGGTCAAATGCCCGCCAGCATCTAAAGACAT-GCCAAGGATTGTGTCCCCTGGTGT 9666 Query 6985 CAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGC 7044 || | ||| || | || |||||||||| || ||| || | || || || || || Sbjct 9665 CAAGAGCGCCTGAAACACCCCTTGGTTTGCTTGGCTACCTGAGTTCGGCTGCACATTGGC 9606 Query 7045 GAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGC 7104 ||||| || ||| |||| |||||| ||||| |||| ||| ||| |||| | Sbjct 9605 GAAATCACACGCAAAAAGTTTACAAGCACGTTCAATCGCCAAGTTTTCGGCAACATCAAC 9546 Query 7105 TTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAA 7164 | || || || ||||| || || | ||| || || ||||| || || || | Sbjct 9545 ATGCTGGCATCCACCATAATAACGACGCCCAGCATAGCCTTCCGCATATTTATTAGTCAT 9486 Query 7165 AATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCAA 7221 ||| || ||||| |||| || || | | |||||| ||||| ||||||||||| Sbjct 9485 AATCGACCCTTGGGCTTGCAGGACCGCTTGTGACACAATATTTTCTGATGCAATCAA 9429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552778354348200