Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq66674 181 9e-41 seq42503 167 2e-36 seq20317 154 1e-32 seq58440 138 9e-28 seq17180 118 9e-22 seq62093 105 6e-18 seq12343 87.8 2e-12 >seq66674 Length=28361 Score = 181 bits (200), Expect = 9e-41 Identities = 169/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| |||||||| | || |||||||| ||||||||||||| || || | Sbjct 27419 ATGCAGATTTTCGTTAAAACACTCACTGGTAAAACAATCACTCTTGAAGTTGAGCCCTCT 27360 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | ||| |||||||||||||||||||| ||||| || ||||| Sbjct 27359 GATACCATTGAGAATGTTAAAGCCAAAATTCAAGACAAGGAGGGCATTCCTCCAGATCAG 27300 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || ||||| || || ||| ||||| | |||||||| ||| Sbjct 27299 CAACGTTTGATCTTTGCTGGTAAACAATTGGAAGATGGACGCACTTTATCCGATTATAAC 27240 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 |||||||||||||| ||| | || || |||||||| Sbjct 27239 ATTCAAAAAGAATCTACCCTTCACTTGGTTTTGCG 27205 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| ||||| | || |||||||| ||||||||||||| ||| | | Sbjct 27875 ATGCAAATCTTTGTCAAAACCCTTACTGGTAAAACAATCACTCTTGAAGTCGAAGCTTCT 27816 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||||||||| |||||||| || |||||| Sbjct 27815 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCCCCAGATCAA 27756 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || ||||| || || ||| | || | || ||||| ||| Sbjct 27755 CAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACGCTTTCAGATTATAAC 27696 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| ||||| || | ||||||||||| ||||| | || || Sbjct 27695 ATTCAAAAGGAATCTACTCTTCATTTAGTTTTAAGATTGAGAGGTGG 27649 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| |||||||| || |||||||||||||| ||||||||||||| ||| | | Sbjct 28103 ATGCAAATCTTTGTTAAGACCTTAACCGGTAAAACAATCACTCTTGAAGTCGAAGCTTCA 28044 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| || || ||||| ||||| |||||||| || |||||| Sbjct 28043 GACACAATTGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAA 27984 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || ||||| || || ||| | ||| | || ||||| || Sbjct 27983 CAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACCCTTTCAGATTATAAT 27924 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| |||||||| | |||||||| ||| ||||| | || || Sbjct 27923 ATTCAAAAGGAATCCACTCTTCATTTAGTATTGAGATTGAGAGGTGG 27877 Score = 161 bits (178), Expect = 8e-35 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| |||||||| | || |||||||| ||||||||||||| ||| | | Sbjct 27647 ATGCAGATTTTCGTTAAAACACTCACTGGTAAAACAATCACTCTTGAAGTTGAAGCTTCT 27588 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || |||||||||||||| || |||||||| || ||||| Sbjct 27587 GATACTATAGAAAATGTTAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAG 27528 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || ||||| ||||||||| || || | || || || ||| Sbjct 27527 CAACGTTTGATCTTTGCTGGTAAACAATTAGAGGATGGACGTACTTTATCAGACTATAAC 27468 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 ||||||||||| ||||| | ||||||||||| Sbjct 27467 ATTCAAAAAGAGTCCACGTTGCATTTAGTTTT 27436 Score = 145 bits (160), Expect = 6e-30 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||||||||||||| | || || ||||| |||| |||||||||||| | | Sbjct 28331 ATGCAGATTTTTGTTAAAACTCTGACTGGAAAAACCATCACACTTGAAGTGGAAGCTTCA 28272 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| ||||||||||| ||||| |||||||| || || ||| Sbjct 28271 GACACAATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGACCAA 28212 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || ||||| ||||||||| | || | || ||||| ||| Sbjct 28211 CAACGTTTGATCTTTGCTGGTAAACAATTAGAGGATGGAAGAACACTTTCAGATTATAAC 28152 Query 22399 ATTCAAAAAGAATCCACC 22416 || ||||| || |||||| Sbjct 28151 ATCCAAAAGGAGTCCACC 28134 >seq42503 Length=950 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| |||||||| || |||||||||||||| ||||||||||||| ||| | | Sbjct 866 ATGCAAATCTTTGTTAAGACCTTAACCGGTAAAACAATCACTCTTGAAGTCGAAGCTTCA 807 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| || || ||||| ||||| |||||||| || |||||| Sbjct 806 GACACAATTGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAA 747 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || ||||| || || ||| | || | || ||||| || Sbjct 746 CAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACNCTTTCAGATTATAAT 687 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| |||||||| | |||||||| ||| ||||| | ||||| Sbjct 686 ATTCAAAAGGAATCCACTCTTCATTTAGTATTGAGATTGAGAGGAGG 640 Score = 161 bits (178), Expect = 8e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || ||||| |||||||| ||||||||||||| ||| | | Sbjct 410 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAAACTATCACTCTTGAAGTCGAAGCTTCT 351 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || ||||||||||| ||||| |||||||| || || ||| Sbjct 350 GATACTATTGAGAATGTTAAGGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGACCAA 291 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || ||||| ||||||||| | || | || ||||| ||| Sbjct 290 CAACGTTTGATCTTTGCTGGTAAACAATTAGAGGATGGAAGAACACTTTCAGATTATAAC 231 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| || |||||| | || ||||| | ||||| | ||||| Sbjct 230 ATCCAAAAGGAGTCCACCCTTCACTTAGTCCTCAGATTGAGAGGAGG 184 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| |||||||| | || || ||||| |||| |||||||| ||| || | Sbjct 638 ATGCAGATTTTCGTTAAAACCCTCACTGGAAAAACCATCACACTTGAAGTTGAAGCCTCA 579 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||||||||||| ||||| || ||||| || ||||| Sbjct 578 GACACCATTGAAAATGTCAAGGCTAAAATTCAAGATAAGGAAGGAATTCCTCCAGATCAG 519 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | |||||||| ||||| || ||||| ||| | || | ||||||||||| Sbjct 518 CAAAGATTGATATTTGCTGGCAAGCAATTAGAAGATGGAAGAACTCTTTCCGATTACAAT 459 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || ||| | || || ||| | ||||| | ||||| Sbjct 458 ATCCAGAAGGAGTCAACCCTTCACTTGGTTCTCAGATTGAGAGGAGG 412 Score = 109 bits (120), Expect = 5e-19 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || ||||| |||||||| ||||||||||||| ||| | | Sbjct 182 ATGCARATTTTTGTCAAGACCTTAACTGGTAAAACTATCACTCTTGAAGTCGAAGCTTCT 123 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || |||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 122 GATACTATTGAGAATGTCAAGGCTAAAATCCAAGATAAGGAAGGAATTCCTCCAGATCAG 63 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || ||||| ||||| ||| || || | || || || ||| Sbjct 62 CAGAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGACGTACTTTATCAGACTATAAC 3 Query 22399 AT 22400 || Sbjct 2 AT 1 >seq20317 Length=5186 Score = 154 bits (170), Expect = 1e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| |||||||| || |||||||||||||| ||||||||||||| ||| | | Sbjct 215 ATGCAAATCTTTGTTAAGACCTTAACCGGTAAAACAATCACTCTTGAAGTCGAAGCTTCA 156 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| || || ||||| ||||| |||||||| || |||||| Sbjct 155 GACACAATTGAAAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAA 96 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || ||||| || || ||| | || | || ||||| || Sbjct 95 CAACGTTTAATCTTTGCTGGTAAACAATTGGAAGATGGAAGAACTCTTTCAGATTATAAT 36 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431 |||||||| |||||||| | |||||||| ||| Sbjct 35 ATTCAAAAGGAATCCACTCTTCATTTAGTATTG 3 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 ||||||||| ||||| |||||| | || |||||||| |||| |||||||||||| | | Sbjct 900 GATGCAAATCTTTGTGAAAACTCTCACGGGTAAAACCATCACACTTGAAGTGGAAGCTTC 841 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || || |||| || || || || ||||| || || || || ||||| Sbjct 840 AGACACGATTGAAAATGTCAAGACCAAGATCCAGGATAAGGAAGGAATCCCCCCAGATCA 781 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 |||||| | || ||||| || || || || |||||| || || | ||||| ||||| Sbjct 780 GCAACGTTTGATCTTTGCTGGAAAGCAATTGGAGGATGGACGTACATTGTCCGACTACAA 721 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||||||| |||||||| | || ||||| || | ||| | ||||| Sbjct 720 CATTCAAAAGGAATCCACTCTCCACTTAGTCCTGAGGTTGAGAGGAGG 673 Score = 136 bits (150), Expect = 3e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||||||||||||| | || || ||||| ||||||||||||||||| | | Sbjct 443 ATGCAGATTTTTGTTAAAACTCTCACTGGAAAAACAATCACTCTTGAAGTGGAAGCTTCA 384 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 383 GACACTATTGAAAATGTCAAGGCTAAAATCCAAGATAAGGAAGGAATTCCTCCAGATCAG 324 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || ||||| ||||| ||| || || | || || || ||| Sbjct 323 CAGAGATTGATTTTTGCTGGYAAACAATTAGAAGATGGACGTACTTTATCAGACTATAAC 264 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| || || ||| | ||||| || | ||||| | ||||| Sbjct 263 ATTCAAAAGGAGTCGACCCTTCATTTGGTCCTTAGATTGAGAGGAGG 217 >seq58440 Length=15377 Score = 138 bits (152), Expect = 9e-28 Identities = 307/457 (67%), Gaps = 13/457 (3%) Strand=Plus/Minus Query 129736 CTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGA 129795 || || || || ||||||| || |||||| ||| || || ||||| | ||||||| Sbjct 5282 CTATATTCTACTATTTCGGTACATAAATTAGAGCATTTTATAGTTCCCAAGTTCTTTTGA 5223 Query 129796 TTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGC 129855 ||| |||| ||||||| || ||||| | |||||| || || || ||||| | |||| Sbjct 5222 TTAGATTTCCGATTGCAAGAGTCCTTGTATAACATGTAGGGAGTCCCAGTTTCAATTTGC 5163 Query 129856 GTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTCTTACAAATTTGCCACAT 129915 | ||| | |||| | ||| | |||| | ||| | |||||| Sbjct 5162 GATTCAATGATGGCCTCCCACACTTTATGAGCAGGTACCTGCCGCCTGAATTTGTTTTCA 5103 Query 129916 TTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTACGGTGTCGAGCAACGGC 129975 | ||| ||| | ||| |||| ||||| ||| || || || | | || Sbjct 5102 TCCTCATATTTAAGATATAGTTTCTCAAAATCTTCACCCCAAACATCATCTAACCCTGGA 5043 Query 129976 GATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAA 130035 ||||| | |||||||| | ||||| || |||||| |||| ||||||||||| || ||| Sbjct 5042 CATTCATGAGGACACATAAGGCTCCAAATACCATCCTCTTCCACTCGTTTCATGAATAAA 4983 Query 130036 TCGGGTACCCACAGGGCGTACAACAAAT--CTCGCGCTTTTCTATCCTCGGCACCC---A 130090 || || | ||| || || || || |||| || || |||| | || || || ||| Sbjct 4982 TCAGGAATCCAAAGAGCATAGAATAAATCCCTTGCCCTTTGC--TCTTCAGCCCCCGTAT 4925 Query 130091 TGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTG 130150 | |||||| ||||| || ||||| ||| || || ||||| ||||| | |||||||| Sbjct 4924 TTTTACGT---AGTTCTAGAAAATCAAAAACATCCGCATGCCAAGGTTCTAAATAAATTG 4868 Query 130151 CCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAAC 130184 | | |||||| || |||| || ||||||||||| Sbjct 4867 CAAATGCGCCAGGCCTTTTGTTACCACCTTGGTCAAC 4831 Score = 116 bits (128), Expect = 3e-21 Identities = 363/558 (65%), Gaps = 12/558 (2%) Strand=Plus/Minus Query 128769 AATTTGCGACTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATA 128828 |||| | || |||||||| || || | ||| || || || | ||||| || | ||| Sbjct 6378 AATTCGTGATTTGTCCACTGTGAACTGAATGGCACTAGCCGCTGCTTTGGTACGAAGATA 6319 Query 128829 GTACATGCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGC 128888 ||||| ||||||||||| ||| ||||||| || | || || | || | | | Sbjct 6318 ATACATCCCTGTTTTCAATCCGAGTTTCCAACCGTAGAAATGCATGGATGTAAGTTTTCC 6259 Query 128889 GTAGGTGGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCG 128948 |||| | || || | | || || || |||||||||||||||||||| | ||||| Sbjct 6258 GTAGTTAGGCTGTGCGATATGTATGTTCAAGGATTGACTTTGATCAATAAAAGCCCCGCG 6199 Query 128949 ATCGGCAGCCATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTC 129008 ||| |||||||| || | | || |||||||| || ||||| ||||||| Sbjct 6198 ATCAGCAGCCATTTGAAGGACCGTCTTTTGAGAAATTTCCCAGACTGTTTTATAAAGCTT 6139 Query 129009 TCTCACGTGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATA--ATT 129066 | | | | || |||| ||| || || ||| || || | |||||| ||| Sbjct 6138 CTTAATATCGTCAGGAATTTGAGGAATATTTTGTACGGATCCATTATCCGCAATAATATT 6079 Query 129067 TTGTTTCGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTG 129126 |||||| ||| | || | | | || || | |||| ||| |||| || || Sbjct 6078 TTGTTT--CATTTCGTCATCCCAAAGATCCATATCAGTCAA---GTCTCTCAA-TAAATG 6025 Query 129127 TTTATT----ACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAA 129182 || ||| | |||||| ||||| | || ||||| | |||||| || ||| | Sbjct 6024 TTGATTCACAATTTGAAATTCACCGGATAAGACGCGTCTGGAGTAAATATTTGATGTGTA 5965 Query 129183 CGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGC 129242 | ||||| ||||||||| |||| |||||| ||||| | ||||| |||||| ||| Sbjct 5964 TGCCTCAATTCCTTCATTGTTACCTAGTATTTGGGCCGTGGAGGCGGTTGGCATGGGAGC 5905 Query 129243 CACGCAAAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTC 129302 | ||| || || || | |||| | ||| | | ||||||| || ||| || Sbjct 5904 AAGAAGAAGGGAATTCCGTACTCCGTCTTTAGCAATTTTTGCCTTTAATTTTGACCAATC 5845 Query 129303 CCACATCGATGTGGGTGT 129320 |||||| |||||| || Sbjct 5844 CCACATATTTGTGGGGGT 5827 >seq17180 Length=12851 Score = 118 bits (130), Expect = 9e-22 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || |||||||| | || ||||| || || || | Sbjct 3932 ATGCAGATTTTCGTGAAGACCCTCACGGGTAAAACTATTACCCTTGAGGTTGAGGCCTCA 3991 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || ||||| || || |||||||| ||||| || ||||| Sbjct 3992 GATACTATCGAAAATGTTAAGACCAAAATCCAGGATAAGGAGGGAATTCCTCCAGATCAG 4051 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || || || ||||||||| ||| ||| | || || |||||| Sbjct 4052 CAACGTTTGATCTTTGCGGGAAAGCAATTAGAGGATGGCCGTACCCTTTCGGACTACAAC 4111 Query 22399 ATTCAAAAAG 22408 |||||||||| Sbjct 4112 ATTCAAAAAG 4121 >seq62093 Length=56387 Score = 105 bits (116), Expect = 6e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 ||||||||||| || || |||||||| || || || || | || ||||| || ||| | Sbjct 3720 AAGATGCAAATCTTCGTCAAAACTTTGACGGGCAAGACCATTACCCTTGAGGTCGAACCT 3661 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | |||||| | || || | || || || || || ||||| || ||||| || ||| Sbjct 3660 TCAGATACCATCGAAAATGTGAAGACTAAGATCCAGGATAAGGAAGGAATTCCTCCAGAT 3601 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || |||||||| || ||||| ||||| ||| | || ||| | || | || ||||| Sbjct 3600 CAGCAACGTCTCATCTTTGCTGGCAAGCAGCTCGAAGATGGAAGGACTTTGTCTGATTAT 3541 Query 22396 AACATTCAAAAAG 22408 |||||||| |||| Sbjct 3540 AACATTCAGAAAG 3528 >seq12343 Length=6788 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/214 (70%), Gaps = 13/214 (6%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | | |||||||| | || ||||| || || || Sbjct 2377 ATGCAGATTTTCGTAAAGACCCTTGCGGGTAAAACTATTACCCTTGAGGTTGAGGCC--- 2321 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAG-ACAAGGAGGGTATTCCACCC---GA 22334 || || | | || ||||||||| ||||| | |||||||| || || || || Sbjct 2320 --TATCGAAAATGTTA--AAACAAAAA--TCAAGGATAAGGAGGGAATACCTCCTCTAGA 2267 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| |||||| | || |||| || ||||| ||||||||| || || | | || || Sbjct 2266 TCAGCAACGTTTGATCTTTGTTGGAAAACAATTAGAGGATGGTCGTACTCTTTTGGACTA 2207 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTT 22428 ||||||| ||||||||||||| | ||||| ||| Sbjct 2206 CAACATTAAAAAAGAATCCACTCTTCATTTGGTT 2173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419302574848225