Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq27661 105 1e-17 >seq27661 Length=34041 Score = 105 bits (116), Expect = 1e-17 Identities = 118/155 (76%), Gaps = 6/155 (4%) Strand=Plus/Plus Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 |||||| | |||||||||||||||||||| || || | || || ||||| |||||| | Sbjct 21998 GCCTTTGCTGCCGTCGAGGGCATCTTCTTTTCAGGGTCATTTGCTTCCATATTCTGGTTA 22057 Query 42771 AAGCAGAAGGTG---TCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGAC 42827 ||| || ||| || |||||||| |||||||| || |||||||| || || ||| Sbjct 22058 AAG--AAACGTGGACTC-ATGCCCGGTCTCACCTTTTCAAACGAACTTATATCTAGAGAC 22114 Query 42828 GAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTT 42862 ||||| |||||| || |||||||| || |||| Sbjct 22115 GAGGGATTGCATACAGATTTTGCCTGTCTTATGTT 22149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943357500380400