Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepeophtheirus_20salmonis_20[genbank_20GCA_5F001005205.1_202015-05- 08] 83,165 sequences; 665,129,626 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq62513 82.4 6e-11 >seq62513 Length=16086 Score = 82.4 bits (90), Expect = 6e-11 Identities = 134/193 (69%), Gaps = 9/193 (5%) Strand=Plus/Plus Query 69536 TTATGTGTTTTTCTTTTACCGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAAGACCAT 69595 || ||||| |||||||| ||||||| || || || | ||||||| ||||| | || Sbjct 9885 TTTTGTGTATTTCTTTTTTCGAGAAGGTGCTGTGGAATACTTTAACTGTGGAAAAGCTAT 9944 Query 69596 TTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCCACATCGGTACTCGGA 69655 | ||| | || || | ||||| || ||||||| || || || || | || Sbjct 9945 ATTTTCTCGCGTTGCAAGAGTCTGTAAGAATGATCCTGGTGGAACA----GGAAATC--- 9997 Query 69656 TAAATGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAATTCCCCTT 69715 | |||| ||||||| | |||||| |||| || ||||| ||||| || | | || || Sbjct 9998 --ATTGGATGTCATTTATTAAGACTAGACTTAACTGTTCTGTGCCTGGAGCTTATCCTTT 10055 Query 69716 TTACTTTGACGAA 69728 ||||||||| ||| Sbjct 10056 TTACTTTGATGAA 10068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407829415536440